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Submitted SNP(ss) Details: ss114128293           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_3433485_chr22_28112433
RefSNP(rs#)rs715494
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:136

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss114128293|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 ACGGTCCAGG TCAGGTCACA CTGCCAGGAA GCTGCTGAGC TGGGGTTGAA CCCAGGGCTG
 ACTGACTGGG AGTCTGGTGA TCTTTCCATC ATACCTCTGG GCTCTTGAAG CAGCTCAGGG
 TGAAGCCTCC ACTGACCTAC ACTCAACAGA TGATCTTCAC ACAATCTCTG AGGGATCTGA
 CTCTTTGAGA CCTACTGAAG
 M
 TGCTCCTCAT GACAGTTTCT AAGAGGTCAG AGGAGACTGG TGGGCTCAAC TCAGGACAGA
 AAACCAGAAG CTCTGAGCTC TGCTCATGTT CCTACCCTCT GTGACAAGTT GCTTCATCTC
 AAATCCTCCC TTGGAAGGAT GGGAATATAA GGTGACAATA TTAAGTTTCT GTGAATTCAA
 TGGAACTAGG AGAATAGATC

  Submitted Frequency for ss114128293 back to top
There is no frequency submission for ss114128293.


  dbSNP summary of Genotypes for ss114128293 back to top
No sufficient data to compute Hardy-weinberg probability for ss114128293.


  Submitted individual genotype for ss114128293 back to top
There is no individual genotype data for ss114128293.

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