NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss114417933           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_2569571_chr13_23907441
RefSNP(rs#)rs13428
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:116

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss114417933|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 CTGACGATAT GAGGCAAAAG ACAAGGAAGC AGGACTGTGA GCGCGGGCAG TCGGGGGAAG
 ATAGGAACCA ACGGCCGGAG CCAAAATAGG AAAAAAGCTA GAAGTAGATG TTTCCCATGG
 ACTGACTTTC TTAAATAGTG GTTCAGTTGC TGTTGGTTTA CATGACTCTG TCCAACTTAA
 ATCCAATAGC TTTTCCACAC
 S
 TCCACGTTCC AAATTTGATG TGAAAGCTGG TAGTACACCT AAGCCATCCT CTTCAAAATC
 TTCAGAAACT TCTGGCTGAG ATAATTCCAT TTTTCTTTTG GAAAATGGAA TTTTCCTATG
 TTTTCGTTTG GATAAACGTA ATTCTGGCCA CTCAGAGGAT GCTAAAAGAG ACTGCCCAGA
 AGACAGAATT ATTAACGTAA

  Submitted Frequency for ss114417933 back to top
There is no frequency submission for ss114417933.


  dbSNP summary of Genotypes for ss114417933 back to top
No sufficient data to compute Hardy-weinberg probability for ss114417933.


  Submitted individual genotype for ss114417933 back to top
There is no individual genotype data for ss114417933.