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Submitted SNP(ss) Details: ss115138948           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_3560760_chrX_124142828
RefSNP(rs#)rs617
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 19 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:110

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115138948|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CGAGCATACA CTATGTTATA TGCCAGGCAT TGTGCAAGGT GTTTTATGAA TTATTTGCAT
 GCCATTTTCA ACATCACAAC TCTGTGAGGT ATAATTATTA TTCTCATCTT AGAGGTTAGG
 AGATTGAGAT TTAGAGAGAT TATTCTTAAT CTACTTGCCC AAGCTGTACA GTCAATATGT
 GGCCGAATTG GATCTTCTCT
 Y
 GGTTTTAAAC CCCAAAGCAT ATGCACTTAC CCTCTACTAC AGAATTAAAG AGGACACACT
 CAAGCTACAG CATTTTTAAA AAGGAAGAAA AGGAGAAGAG AGGAGAGAAA TCATTCTGGG
 TTGCAAACAA ACGTATCTGA GGACTGGCCC TGAGCAATCG GCCACTAGCT TGAAACTTCA
 ATTTCACACT CTACTTAATA

  Submitted Frequency for ss115138948 back to top
There is no frequency submission for ss115138948.


  dbSNP summary of Genotypes for ss115138948 back to top
No sufficient data to compute Hardy-weinberg probability for ss115138948.


  Submitted individual genotype for ss115138948 back to top
There is no individual genotype data for ss115138948.

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