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Submitted SNP(ss) Details: ss115221478           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_2055593_chr10_117924
RefSNP(rs#)rs9419541
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 19 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:127

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115221478|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GATCTGTGTC CTGCTCAGCC TTGTACTCAG CTGCCCAGGC TCCTAACAGT CACACCTACC
 ACCTTGGGGA AAAGGGGAGA CTCTGCCAAG AGCCAGGTGC CCAGTTTAGG GTTCAAATTG
 AATATTTGGA CAAAAATCTT GAAAACTAGG CTCCTCATTG AGAGAGAAAA GGATGTTTCT
 GCATAGTAAG TTGGAGCTGC
 R
 GTGCGGAGGG GACATCCTTG CCACACAGGG CCCAGGGATG CCCTAGGGCA CAGGGAGGGA
 AGATCCTGGA GAAGAGGGGT CAGCTTGGCC CAGAACCCAG GGAGGGGCCC TCACTGCTTC
 TTGTCCTTTG CCCAAAGTGA GGAGTCTGAG GGGAACAACC AGGGACCACT CACTGGAGCC
 CTCCCTCTCC CCCTCCTCCC

  Submitted Frequency for ss115221478 back to top
There is no frequency submission for ss115221478.


  dbSNP summary of Genotypes for ss115221478 back to top
No sufficient data to compute Hardy-weinberg probability for ss115221478.


  Submitted individual genotype for ss115221478 back to top
There is no individual genotype data for ss115221478.

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