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Submitted SNP(ss) Details: ss115221599           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_2055608_chr10_125853
RefSNP(rs#)rs7906287
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 19 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:129

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115221599|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 TTTTTAAAAG AGACAAGATC TATCTTGCCC AGGCCACAGT GTTATTCACA AACACGATCA
 TGCACTGTAA CCCCAAACTC CCAGGCTCAA GTAATCTTCC CACCTCAACC TCCCAAGTAA
 CGTAGATAGG ACTACAGGCA CATGCTCCCA GCCTGCTACT TTCTTATTTA GCAACCTCTT
 AATCTTAAAA TGAGAGCAGA
 R
 TATCCCTCAT CAACTGCTAG GAAATAAAGA TGGTGTGTCA TGTCATATTC AAATATAAAG
 AAGAAATATA TTTCTATAAG GTTAATAATT AAAAAAATAA CATATCTAGC TAAATAAAAT
 AAATTATTTG CACACGGGTC CAGGATATTA AAACAACTAA AAAGCAGAGA GAATTATTCC
 AACTTTTTTT AGTGTTGCAA

  Submitted Frequency for ss115221599 back to top
There is no frequency submission for ss115221599.


  dbSNP summary of Genotypes for ss115221599 back to top
No sufficient data to compute Hardy-weinberg probability for ss115221599.


  Submitted individual genotype for ss115221599 back to top
There is no individual genotype data for ss115221599.

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