NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118445573           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000001688_NCBI36.1_chr1_2503076
RefSNP(rs#)rs734999
Submitted Batch IDILLUMINA_WTSI:NA18507_c1
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118445573|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TAAAATAACT CATTCATGTG TTACTAAAAA CAGGAAATGC CGTCTAACGG GATCTCTGGA
 TGGAGAATTC CACAGCTGAT TGGAACCTAA ACGAGAGAAC CAAATGGACA TCCCAGGGCT
 GCAGGTCAGT GTCATGAGAC GGGTGATGGC AGACTGGACC CCGTGGCAGG TGGACCATGG
 AGGGGAGACA GAGACAGGGC AACAGAAACG GTGCAAACAG CCACTGAAAT ACCCGTGGGA
 AAGAAAAGCA
 Y
 AACAGAGAAC AGGAGACTTA TGTGACTCCG ACTCAACAAG ACGCATTAGT TAAAAGATCT
 AATATATGCG TATGGGGCTT CCCAGAATAA GAGGAAGGAA GGAAGGAAAG AATGAGACAT
 CATAAGATAG TGTTAAAAAA AAAAGAATTC CCAGCCGGGC ACGCTGGCTC ACGCCTGTAA
 TCTCAGCACT TTGGAAGGCC ATGGCGGGTG GATCACCTGA AGTCAGGAGT TCAAGACCAG
 CCTGACCAAC

  Submitted Frequency for ss118445573 back to top
There is no frequency submission for ss118445573.


  dbSNP summary of Genotypes for ss118445573 back to top
No sufficient data to compute Hardy-weinberg probability for ss118445573.


  Submitted individual genotype for ss118445573 back to top
There is no individual genotype data for ss118445573.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement