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Submitted SNP(ss) Details: ss12390818           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr17.NT_010783.13_17742899
RefSNP(rs#)rs281865545
Submitted Batch IDWI-WGS-200306-C
Submitted DateJul 04, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 4 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWI-WGS-200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginG:Germline C:Both
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S213P603670RF7.T0position:-628quality:24

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12390818|allelePos=516|len=716|taxid=9606|alleles='G/C'|mol=Genomic
 GAAGAagcat tttgggaggc caaggcaggt ggatcacttg aggtcaggag ttcgagacca
 gcctgaccaa cacagtgaaa ccccatctct actaaaaata caaaattagc caggtgtggt
 ggcacacacc tgtaatccca attacttggg aggctgaggc aggagaatcg cttgaacctg
 ggaggcagag gttgcagtga gccgagatca caccactgca ctccagactg ggtgacagag
 tgagactcca tcAaagaaag aaaggaagga aggaaggaag gaaggaagga aggaaggaag
 gaaggaagga aggaaggaag gGCCTGGCCT ATTGGGAATA TGTCTAGTGC TTACGTATTC
 AGGTAAGGAA AATGCCAGGC AGATGAATGA GAGGGTGATG GGTGGAGAGT TAAGTCCAGT
 GTCACTATTC ATTCACAGCT GTTATTCACG CCACTGTGTG CTATGCTCCA TCTGCTTGCC
 TGTGCTCAGT TCCAAGGACT CACCTTCCAC CAACA
 S
 CTGGTACTCT GCAGTGGTTT TCTCTTTGTT GTTCACAATC ACAGTACATT TATATGTCCC
 TGAGTCATAG ATCCGGACTT CAGGAATAAA ATAACTCTCT GTGCTCTTCA TGGAGGAGAT
 GTTGTAAAAC AGCACGTCAT CCTTATAGAA CAGCATCTGG TGCTGAGGCT TGACGTGAGA
 GGTGGTGCTG ACATCCGCGA

  Submitted Frequency for ss12390818 back to top
There is no frequency submission for ss12390818.


  dbSNP summary of Genotypes for ss12390818 back to top
No sufficient data to compute Hardy-weinberg probability for ss12390818.


  Submitted individual genotype for ss12390818 back to top
There is no individual genotype data for ss12390818.

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