NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss12859772           
Submitter
HandleSC_SNP
Submitter SNP IDNT_033951.3_2532039
RefSNP(rs#)rs2233967
Submitted Batch IDCHR6_NA11321
Submitted DateOct 21, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA11321
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S6A_2-695c06.q1kposition:-334quality:51sequence:S6A_2-55j06.q1kposition:-230quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12859772|allelePos=201|len=801|taxid=9606|alleles='C/G'|mol=Genomic
 TATACACAAG GACCTCCACC CTGGGGTCCC ACTCTCTTAA TTGCCTCTCT CAGCAACAGA
 AACACTTGTT TCTTTTTGGG AGCTGGATTG TTTCCTCCCA GCACCCCTTT CTCGTGCATC
 CTCATATCTC CTTCACCTTG GCCCCAACCT GCAGGAGGTT CTGGGGTGCA GAAGTGGCCC
 CATCTGAGGA GCTGCTCCTA
 S
 ATGAGACCCT GGATCTAGCT AGGGAAATGG GCCTGGATGC CATCCTTATG AGATACTGAC
 TAAttcctgc tgctgcagtg acaaattacc atgaaccgaa tggcttacaa caacatggat
 ttattacttt acagttttgg agatcagaag tctaaaacag gtctcagtgg attaaaataa
 aggtgtcagc agggctgtga ttctttctgg gggcctcagg ggaaaatccc tttccccgct
 ttttcacctt ctagaggcat cctgtgttct ttggctcatg gtccccttcc tccatctcca
 aagccaaaat cagccatttc ttacactgta tcactcagac ttcctcttct gcctcccatg
 tccacattaa gggacccggt gactacactg gacccacctg aataatccat gataatctct
 gtgaagtcag ccgaatagca accttaatcc catctggaac cttaatttcc ctttgccatg
 taacctaatt cctacgttcc agggattagg atgtggacat ctttgatggt gttggggttg
 aagacatcat tctgcctgct acTGGTGGTC AGATGTGCCA TAGAGTATAA GAAACCTTGG

  Submitted Frequency for ss12859772 back to top
There is no frequency submission for ss12859772.


  dbSNP summary of Genotypes for ss12859772 back to top
No sufficient data to compute Hardy-weinberg probability for ss12859772.


  Submitted individual genotype for ss12859772 back to top
There is no individual genotype data for ss12859772.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement