Submitter Handle 1000GENOMES Submitter SNP ID PHASE3_V1_2886285 RefSNP(rs#) rs7554246 Submitted Batch ID Phase3_V1 Submitted Date Aug 16, 2014 Publication Cited N.D. First entry to dbSNP Aug 16 2014 12:00:00:000AM Resource Links Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method SEQ Ascertainment Samplesize 5008 Population N.D. Allele Observed Allele T/C Ancestral Allele N.D. Allele Origin N/A SNP Class SNV CpG Code N.D. Validation Validation Status Not Validated HWE Goodness of Fit not applicable Homozygote Detected PCR Confirmed In Expressed Sequence Variation Frequency Submission population count: 5 Genotype Summary N.D. Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss1292108422|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic CACTGTTTCC AGTTTTTAGT AATTA Y GGATAAAGCT GCTCCAAACA TTTAT   Submitted Frequency for ss1292108422 Population ID  -Class Sample (2n) Major Allele Freq. Minor Allele Freq. Estimated Heterozygosity +/-std.err. Genotype Freq. Submitted Hetero- zygosity Submission Batch Submitter EUR 1006 T=0.56360000 C=0.43640000 Phase3_V1-EUR 1000GENOMES SAS 978 T=0.86500001 C=0.13500001 Phase3_V1-SAS 1000GENOMES AMR 694 T=0.70169997 C=0.29830000 Phase3_V1-AMR 1000GENOMES EAS 1008 T=0.98119998 C=0.01880000 Phase3_V1-EAS 1000GENOMES AFR 1322 T=0.89940000 C=0.10060000 Phase3_V1-AFR 1000GENOMES   dbSNP summary of Genotypes for ss1292108422 No sufficient data to compute Hardy-weinberg probability for ss1292108422.   Submitted individual genotype for ss1292108422 There is no individual genotype data for ss1292108422.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement