| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008583.15_11051401 | | RefSNP(rs#) | rs4948265 | | Submitted Batch ID | CHR10_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008583
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR10_OVERLAP_SNPS | | Ascertainment Samplesize | 6 | | Population | N.D. |
| | Allele | | Observed Allele | T/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:10bA338F14-6h08.q1cposition:292quality:45sequence:10bA338F14-1f07.q1cposition:-339quality:33sequence:10bA338F14-28b10.q1cposition:-112quality:40sequence:10bA338F14-22e05.p1cposition:-350quality:40sequence:10bA338F14-28b10.p1cposition:406quality:35 |
>gnl|dbSNP|ss12953975|allelePos=300|len=450|taxid=9606|alleles='T/G'|mol=Genomic CATCTAGGAT GCAGGGGAAG AGGAATAAAA AAAGTGACAC CTTCAGAACA GAATTTGGGG
GAATAAAGAG GGCCAGACTT TCAATTAAAA TATTTTCATC Tggccaggtg ctctatctca
cagctgtaat cccagcattt tgggaggctg aggcaggtgg atcatttgag cctaagagtt
tgagaccagc ctgggcaaaa caccatctct acaaagaaaa aaaaaaaaag aattaaaaat
tagtcgggca tgatggtgca tgcctgtggt cccagctatt tccaaggccg aggcaggag
K
atcacctagc ttgacccccg gaggtggagg ctgcagtgaa ctgtgattgt gccactgcac
tcctgcctgg gcgacagcca gaccctgtct caaaaaataa aaTTTCATTT TTATTTCTTC
CCACATAACT CCTGTTAGTC CTTTCTCGTT
There is no frequency submission for ss12953975.
No sufficient data to compute Hardy-weinberg probability for ss12953975.
There is no individual genotype data for ss12953975.
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