Submitter | Handle | SC_SNP | Submitter SNP ID | NT_024115.14_66402 | RefSNP(rs#) | rs1984905 | Submitted Batch ID | CHR10_Overlap_SNPs | Submitted Date | Oct 22, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_024115
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR10_OVERLAP_SNPS | Ascertainment Samplesize | 8 | Population | N.D. |
| Allele | Observed Allele | T/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:GTCm5-d05.q1cposition:221quality:36sequence:GTCm8-d10.q1cposition:672quality:25sequence:GTCqd-c07.q1cposition:407quality:35sequence:GTCm4-h02.p1cposition:101quality:35sequence:GTCqc-h08.q1cposition:290quality:35sequence:bA145I2-12c08.p1cposition:71quality:32sequence:GTCm4-g04.q1cposition:-531quality:35 |
>gnl|dbSNP|ss12973421|allelePos=151|len=301|taxid=9606|alleles='T/C'|mol=Genomic AGTCCCAGAC AAGGGTTCCA GAGACTTAAG TCCATTTTCC CAAAATGGAC ATGATGCATA
TGGCAAGTCA GGGACTTAGA ACGTCCAGGA CCAAGCCTTG CTGAGGACGG AAGGGAGCAA
CGTGCCCTGG AGGTCCTCAT GCAGCCCGGA
Y
CTCTGGCAGT GACCAGCCAG CACCCAGGCA TCTCCTTGCT GGGTCTCCAA GCCCTGATGG
TCACAGAAAA GGCCACAGGC CAGGGCTGGG ATGGGCCCAG GGCTCTGTGT GTTTCCTGGG
AGGGATGAGG GGTGGCATCC CCCGTAGCAG
There is no frequency submission for ss12973421.
No sufficient data to compute Hardy-weinberg probability for ss12973421.
There is no individual genotype data for ss12973421.
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