| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_024115.14_73273 | | RefSNP(rs#) | rs3020676 | | Submitted Batch ID | CHR10_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_024115
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR10_OVERLAP_SNPS | | Ascertainment Samplesize | 13 | | Population | N.D. |
| | Allele | | Observed Allele | G/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:GTCm4-e10.q1cposition:259quality:56sequence:yRM22O3-2o15.q1kposition:124quality:42sequence:yRM22O3-3j04.p1kposition:81quality:42sequence:GTCqd-a04.p1cposition:-495quality:35sequence:GTCqg-f09.q1cposition:-101quality:51sequence:GTC51-b05.p1cposition:452quality:40sequence:GTCq9-b02.p1cposition:202quality:56sequence:yRM22O3-2m15.p1kposition:-140quality:28sequence:GTCm5-b06.p1cposition:146quality:45sequence:GTCm8-a06.q1cposition:505quality:56sequence:yRM22O3-2g05.p1kposition:397quality:42sequence:yRM22O3-1e13.p1kposition:-103quality:32 |
>gnl|dbSNP|ss12973458|allelePos=151|len=301|taxid=9606|alleles='G/C'|mol=Genomic AACAGATGGC ACTTCCTTAA CTCTGTTGCA CCCCTGTTCC AAGGTGCCTC CAAAGGACAG
CACCACCAGA AGGGCAAAGC CCCCCATGCT GGAGTATGAG CCTGAGTCCC AGGATCCCTG
GAGGAGCCAG AGGTTGGCTG GAGATAAGGC
S
CTCGGTGTCA GGAAGCTCTT GTGTGTGGGA AAGCTGCTGA CGCCCTATCA CCCCGTTTGC
AGCTCCACTG ATACACCCAT AACCCGTAGG CAGGAAGCAG GGCCAACCTG GTTACACAAG
ACTGATTAGT GATAAGGAGG AGAAAAAAAC
There is no frequency submission for ss12973458.
No sufficient data to compute Hardy-weinberg probability for ss12973458.
There is no individual genotype data for ss12973458.
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