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Submitted SNP(ss) Details: ss12982616           
Submitter
HandleSC_SNP
Submitter SNP IDNT_030059.10_8165293
RefSNP(rs#)rs701848
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA765C10-38c07.q1cposition:324quality:37sequence:10bA765C10-17g03.q1cposition:168quality:33sequence:10bA765C10-4g10.q1cposition:328quality:37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12982616|allelePos=151|len=301|taxid=9606|alleles='T/C'|mol=Genomic
 CATTTGATTT TTCAGTAGAA ATTGTCCTAC ATGTGCTTTA TTGATTTGCT ATTGAAAGAA
 TAGGGttttt tttttttttt tttttttttt ttttAAATGT GCAGTGTTGA ATCATTTCTT
 CATAGTGCTC CCCCGAGTTG GGACTAGGGC
 Y
 TCAATTTCAC TTCTTAAAAA AAATCATCAT ATATTTGATA TGCCCAGACT GCATACGATT
 TTAAGCGGAG TACAACTACT ATTGTAAAGC TAATGTGAAG ATATTATTAA AAAGGTTTTT
 TTTTCCAGAA ATTTGGTGTC TTCAAATTAT

  Submitted Frequency for ss12982616 back to top
There is no frequency submission for ss12982616.


  dbSNP summary of Genotypes for ss12982616 back to top
No sufficient data to compute Hardy-weinberg probability for ss12982616.


  Submitted individual genotype for ss12982616 back to top
There is no individual genotype data for ss12982616.