| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004321.15_1039556 | | RefSNP(rs#) | rs6703035 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004321
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 12 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bB531C17-24e05.q1cposition:427quality:32sequence:1bB15E13-1o14.q1kposition:313quality:56sequence:1bB531C17-3b02.q1cposition:210quality:43sequence:1bB531C17-20h04.p1cposition:-375quality:23sequence:1bB531C17-2c11.q1cposition:-587quality:29sequence:1bB15E13-2m13.q1kposition:498quality:51sequence:1bB15E13-2o21.q1kposition:604quality:40sequence:1bB531C17-15c12.p1cposition:-572quality:23sequence:1bB531C17-20d04.p1cposition:434quality:32sequence:1bB531C17-5b07.p1cposition:377quality:45sequence:1bB531C17-14a03.q1cposition:-122quality:35 |
>gnl|dbSNP|ss12992573|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic GAGGACGGGA GTGTGAATCC TAGGCCACCC GTGGAGCCTT CGCACTGCAC AGCCAGTTTG
CAGGTGGAGA AGGATTTTGG TCACACGATT CTGATTATTA GCCTGCTTAC TAAGGAACCA
GAACATGAAG ACAGGCTTGG ATGCTTTATT TTGCTTTTAA AGGGATGGGG TCTTGCCATG
TTGCCCTGGA CGGGGATGCT
Y
TTTTGAATAA GTCAAAATGG AGGGATGCAG ACTACACCTG CTCAGCGGCG CTGTCCCTCA
CCTGGCTGCA GTGCCGGGGC CTTCTGCAGA ATGTGTGTCT TGCGCAGGTT CATCGTGCAG
CCGGCTGGGC CCATCAGGTG AGCTTTCCAT GCCTGCAGCA GAGGAGGCAC ACAGAGTGTT
AATCAGGCGA GACGGACCTG
There is no frequency submission for ss12992573.
No sufficient data to compute Hardy-weinberg probability for ss12992573.
There is no individual genotype data for ss12992573.
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