Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004610.15_1796069 | RefSNP(rs#) | rs631357 | Submitted Batch ID | CHR1_Overlap_SNPs | Submitted Date | Oct 22, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004610
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_OVERLAP_SNPS | Ascertainment Samplesize | 14 | Population | N.D. |
| Allele | Observed Allele | G/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:1dJ930J4-19a02.q1cposition:172quality:45sequence:1dJ930J4-19g10.p1cposition:-78quality:45sequence:1dJ930J4-21e08.q1cposition:423quality:35sequence:1dJ930J4-22c09.q1cposition:-453quality:37sequence:Xgm16c06.q1cposition:-223quality:56sequence:1dJ930J4-18d12.q1cposition:-193quality:44sequence:Xgm17b06.p1cposition:-334quality:25sequence:Xgm17b11.p1cposition:450quality:29sequence:Xgm20f12.q1cposition:217quality:35sequence:1dJ930J4-12f10.p1cposition:-564quality:25sequence:1dJ930J4-18a08.p1cposition:328quality:43sequence:1eo81c06.q1cposition:-146quality:56sequence:1dJ930J4-23b10.p1cposition:-338quality:56 |
>gnl|dbSNP|ss13005281|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic GAACCCAGGC CTGTCTGACT TCAAAACTAT CCCCTTCACG CCTCTCCCAG TTGTGTGGAG
AGGGTGGGGA CAGGGGAGGG ACACTCACTG AGGCTCTTCC TGGCGTCTGT GCTGAGGATC
TGGCTGGCCC GCTTAGATCG GAAGTAGTTG CTGGCAATGT TTTCACTGTT GCTCCGACTG
AGCATGAGCC TGTAGCGGTC
S
TCCTCCTGCC GAGATGCAGA TGCCCGTGGT CACGTCCCCT TGTTTGTGCC CCTGGCACAG
GGCTCCACAG CCTCTGGTAT CCTGGGGCAG TGGGGGCCGC CCCGAGCTTC CCCGAAGTTG
TCACAGGGCT GGAGCAGGCA CTGCCCACTC TGGTGTACCC TACACCGTAG ATCCTGGACT
CGGGGGTGGG ATCCCAGGCA
There is no frequency submission for ss13005281.
No sufficient data to compute Hardy-weinberg probability for ss13005281.
There is no individual genotype data for ss13005281.
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