| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004902.14_465360 | | RefSNP(rs#) | rs323951 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004902
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 7 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bA60P19-8g03.q1cposition:-337quality:56sequence:1bA60P19-8h12.p1cposition:-292quality:56sequence:1bA60P19-1h02.q1cposition:438quality:48sequence:1bA60P19-7d08.p1cposition:-286quality:42sequence:1bA60P19-7c05.p1cposition:-497quality:35sequence:1bA60P19-8h02.q1cposition:-139quality:37 |
>gnl|dbSNP|ss13020154|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic AACTATAAAT ATTACATAAT GCCTTTTAGT TAAAGAAAAT TAAAACAACG GAAGGAGGAA
ATTTTCTGCA GGGACTTTCT TGTAACCCCT TGGAAGAAAA CATTCTCTCT TCCTCTTTCT
GTCTTGCTCA TGGCTTTCTC ACACCCAAAA ATCAGGTTTG AGTAAATACT TTTCTTCTTA
CAATTTCTTG CACTATCAAT
R
TGCTCTTTTT CTAGTTCTTG GATTGTCTAT TTATTGATTT TTTTTTCTCT TTTCTGAGTG
AAAATGCTGA ATGCAGTTCC TCTAGAAAAA AATGCTTAAC TTTCTGTCAA CCTTCTGGTT
TCCTTAGAGG ATTTGGTACA ACATAGAAAT GTGATTGGCG ATGTCTATTC TCAGGGGCCT
GCCTCTCCTT TTGAAATAAA
There is no frequency submission for ss13020154.
No sufficient data to compute Hardy-weinberg probability for ss13020154.
There is no individual genotype data for ss13020154.
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