>gnl|dbSNP|ss1307064|allelePos=148|len=864|taxid=9606|alleles='C/T'|mol=Genomic
AAAAGTGGGG GTAATTGAGC CTTGTATGTA ACACAGAGAC TTCCTCTTGC AAGCCAGTAG
TCCTCAATCG TATGCATTTC AATCATCTGG AAAGCTTTTT TTAAAAAAAT GTTTATACCT
GGATCCTGGG ACCATTGAAT TAGAATA
Y
TCAGGTAGAG CATGTCCTGA GCATCTGTTT TTCTTTACAT TGTCCATGGA TGATTCTGAT
TTGCAGCTAG ATGACCTCTT ATTTGTTACA GGTAATGAAT ATCCACTAAA GAAACTTGAT
CAGGGGCATG GCATAACCCT ACACGTTCAA ACTGAAAACT GGAAAGCTTT GTATGAAATG
GAGTCCATCT TATAAACACT ACTTCTATAG GTGCCAGTAG GTCACTATCA TCCCCAATTC
AGTACACCTG AGGGGTAATT GTTCTAGACA CAAAGAAATA GTAGGATCCA ATGACCACGG
CATACCTAGC CCTGTTATGG GAACTGCCTG ATAGTAGCGT CTGCCTCTTC ATCACACCAT
TGCAAAACTG AAGGCTGATA AGATTTCAAT CTCTAGCTAT TTAAGGATCC TTTTAATGAA
ACAAGATAAA CTTTATATTT CTAATTCCAG TTATATCATC TTGTCTTATA GTGATCCGTG
GAAACTAAAA CTGCTATTCT GTTCAACCTT TTCACATCAC AAATCTGGTG AAATAAATTA
AGCTAGCCAG CCGACTTTCT TCACTCTAGC ACATTAGGTT TAAAGGAGAA AAGCTGCTTT
GAATACACCA TCAGTAGGAC CTATCTCTTA TTCCTGGTTT TCTCTTGATA CATTTCATGA
TTCTGTCTGC TCAGGGATAG AAAAAGCGAT GAACGTTCCA TCAAATAGAA CTGCTG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.58849555
| C=0.41150442 | C/T=0.50442475
T/T=0.33628318
C/C=0.15929204
| Pr(chiSq=0.194,df=1)
=0.752 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | T=0.84883720
| C=0.15116279 | T/T=0.72093022
C/T=0.25581396
C/C=0.02325581
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.94767439
| C=0.05232558 | T/T=0.89534885
C/T=0.10465116
| Pr(chiSq=0.027,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.81858408
| C=0.18141593 | T/T=0.66371679
C/T=0.30973452
C/C=0.02654867
| Pr(chiSq=0.207,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.66326529
| C=0.33673468 | T/T=0.44897959
C/T=0.42857143
C/C=0.12244898
| Pr(chiSq=0.081,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHB | 80 | 80 | T=0.80000001
| C=0.20000000 | T/T=0.60000002
C/T=0.40000001
| Pr(chiSq=0.900,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.89411765
| C=0.10588235 | T/T=0.80000001
C/T=0.18823530
C/C=0.01176471
| Pr(chiSq=0.003,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.76136363
| C=0.23863636 | T/T=0.55681819
C/T=0.40909091
C/C=0.03409091
| Pr(chiSq=1.393,df=1)
=0.251 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.68333334
| C=0.31666666 | T/T=0.46666667
C/T=0.43333334
C/C=0.10000000
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 96 | 96 | T=0.69791669
| C=0.30208334 | C/T=0.56250000
T/T=0.41666666
C/C=0.02083333
| Pr(chiSq=5.355,df=1)
=0.025 | Genotype
Freq. |
| HAPMAP-MKK | 282 | 282 | T=0.65602839
| C=0.34397164 | C/T=0.44680852
T/T=0.43262410
C/C=0.12056737
| Pr(chiSq=0.014,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.53977275
| C=0.46022728 | C/T=0.53409094
T/T=0.27272728
C/C=0.19318181
| Pr(chiSq=0.495,df=1)
=0.527 | Genotype
Freq. |
