NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1324159550           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_36286243
RefSNP(rs#)rs429
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1324159550|allelePos=26|len=51|taxid=9606|alleles='G/C'|mol=Genomic
 AATCTAATAA CTATCATTAT TGGCA
 S
 AAAAGGGAAT GAGTGAACAT CATTG

  Submitted Frequency for ss1324159550 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694G=0.92510003
C=0.07490000
Phase3_V1-AMR1000GENOMES
AFR1322C=0.76999998
G=0.23000000
Phase3_V1-AFR1000GENOMES
EAS1008G=0.98409998
C=0.01590000
Phase3_V1-EAS1000GENOMES
SAS978G=0.94679999
C=0.05320000
Phase3_V1-SAS1000GENOMES
EUR1006G=0.95529997
C=0.04470000
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1324159550 back to top
No sufficient data to compute Hardy-weinberg probability for ss1324159550.


  Submitted individual genotype for ss1324159550 back to top
There is no individual genotype data for ss1324159550.