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Submitted SNP(ss) Details: ss1337667693           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_50330392
RefSNP(rs#)rs2448334
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1337667693|allelePos=26|len=51|taxid=9606|alleles='C/G'|mol=Genomic
 GCAGAGGTTG CAGTGAACCA AGATA
 S
 TGCCACTGCA CTCCAGTCTG GGCAA

  Submitted Frequency for ss1337667693 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694C=0.68440002
G=0.31560001
Phase3_V1-AMR1000GENOMES
AFR1322C=0.56510001
G=0.43489999
Phase3_V1-AFR1000GENOMES
EAS1008G=0.58730000
C=0.41270000
Phase3_V1-EAS1000GENOMES
SAS978C=0.64929998
G=0.35069999
Phase3_V1-SAS1000GENOMES
EUR1006C=0.65210003
G=0.34790000
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1337667693 back to top
No sufficient data to compute Hardy-weinberg probability for ss1337667693.


  Submitted individual genotype for ss1337667693 back to top
There is no individual genotype data for ss1337667693.