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Submitted SNP(ss) Details: ss13401127           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011512.8_49651
RefSNP(rs#)rs2821574
Submitted Batch IDCHR22_NA17119.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA17119
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22S17_2-58j17.q1kposition:677quality:56sequence:22S17119-176b07.q1kposition:396quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13401127|allelePos=201|len=401|taxid=9606|alleles='A/T'|mol=Genomic
 cttgaaccca ggaggcagag gttgcagtga gccaagatca catcactgca ctcatcttgg
 gcaacagagt gagacttcat ctcaaaaaaa aaaaaaaTCT TGATTCCTTT ATCCCCTGTG
 CTTCACAGCA TTCAGAGTCT TCCATATTTT CTGGGAGTTT CTTGGTTAGT TGGGCTTGGC
 CTCTCCTCAC TTACTGTTGG
 W
 GCCTGCCCTC TTCTCTGTGC TCCAGAGCAG ATCATGTTTT CTCTACTCAG TTCCCTCTAG
 TGAGGAGACT CATTCCACTT TCACCCCCAC CTTAGCACCA AGCACCATTA ATTCAAGACC
 ACTATGTGGA GGAGATAAGG GAGAATTACA TCCCACGAAG AGCAGCAAAA TGCATAAACA
 TGCATATATA TACACACATA

  Submitted Frequency for ss13401127 back to top
There is no frequency submission for ss13401127.


  dbSNP summary of Genotypes for ss13401127 back to top
No sufficient data to compute Hardy-weinberg probability for ss13401127.


  Submitted individual genotype for ss13401127 back to top
There is no individual genotype data for ss13401127.