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Submitted SNP(ss) Details: ss13405790           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004671.15_2760893
RefSNP(rs#)rs9633350
Submitted Batch IDCHRX_NA11321.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XChr_X_11321_2-287d08.p1kposition:-394quality:46

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13405790|allelePos=2000|len=4000|taxid=9606|alleles='A/T'|mol=Genomic
 GTaattatga gccaataatt ttgtatccag caatgctaag cttcataaat gaaggataga
 taaaatcttt ttcagacaaa caaatgttga gagaatttgc cactaccaag tcagcactac
 aaaaactact aaaaggaatt ctaaatcttg aaacaaaact tggaatacac caaaatagaa
 cctctttaaa gcataagtct cacagggcct ataatactat aacacaatta aaaataaaaa
 cagggtattc aggcaacagc tagcatgata aatggaacag tacctgacat cttagtacta
 gcattaaatg taaatggcgt aaatgctcca cttaaaaaat acagagtagc agagtggata
 aacatccacc aaccaaatat ctgctgtctt caagaaactc aactaacaca gaaggactca
 aataaactta atgtaaaggg atagaaaaag attttctatg caaattgaaa aaagtgagca
 aaagtaacta ttcttatatc agacaaaaca gactttaatg caacaatagt taaaagagac
 aaagagagac attatataat gataacaaca ttttcccaaa aggaaagtat tacaatccta
 aatacatatg cacctaacac tggggatccc aaatttatga aacaattact actggacctg
 agaaatgaga tagatggcaa cacagtaata gtgggggact tcaatactcc attgacagca
 ctacacaggt catcaagaca gaaagtcaac gaagaaacaa aggatctaca tggcctggtg
 cggtggttca tgccagtaat cccagcactt tgggaggcca aggtgggtgg atcacaagtt
 caggagatcg agaccatcct ggctaactcg gtaaaaccct gtctctacta aaaatacaaa
 aacaaaatta gctgggtgtg gttgagggca cctgtatttc cagctactca ggaggctgag
 gtgggagaat ggcatgaact tgggagatgg agcttgcagt gagccgagat tgtgccactg
 cactccagcc tgggcaacag agtgagactc catctcaaaa aaaaaaaaaa aaaaaaaaaa
 aagaaaaaga aaaagaaaaa gaaaaaagaa acaatggatc tacactatac actagaacaa
 atggccttaa cagacattta cagaacattc tacccaaaaa ctgcagaata tacattgttt
 ttatcagcac ttggaacatt ctccaagaga gaccatatga taggccacaa aaaaagtctc
 aatacatttt aaaacattga aattatacca agtactctct cagaccacag tggaataaaa
 ttagaaatta actccaaaag gaacacacaa aactagaaaa atagatggaa attaagtaat
 ctgctcctga ttgatctttg ggtcaacaat gaaataaaaa tggaaattta aaaattattt
 gaactaaatg ataatagtga cacaacctaa gaaaaactct gggatacagc aaaagcagtg
 ctaagaggaa agttcatagc attaaatgtc tacatcaaaa agtctgaaag cgaacaaata
 gaaaatctaa gctcacacct caaggaacca gagaagcaag aggaaaccaa acagataccc
 agcagaagaa aattaacata tctcagagca gaattaatga aattgaagca aaaactacaa
 aagataagtg gtcccaaaag ccggttcttt gaaacgataa acaaaataga taaatagtga
 gattaatcaa gaaaagaaga gagaagatcc aaataaactc aattaaaaac aaaatgggag
 atattatcat caataccaca taaatacaaa ggataattta aggctattat aaacacctta
 tttacacaaa ctggaaaacc tagaagagat ggataaattc ctgaaaatac acaaccctcc
 aagattaaac cagaagaaac agaaactctg aacagaccaa taacaagtag caagattaaa
 acagtaataa taataataa
 W
 aaaaaaaaac ttgtcaacaa aaaaagtcca ggaccagagg gattcacagc tgaattctat
 cagacatgca atggtgatac cattgcatgt ttcagtaggt accaatccta ctgaaactct
 tccaaaagat agagtaagag gtaatctctc gtaaatcatt ctatgaatcc agtatcaccc
 taatacaaaa cccaggaaag gacattaaaa aaaaaacaac tacagactaa tagcagtgat
 gaacatagat gcaagaatcc tcaacaaaaa actagctaaa taaattcaac agcatatcaa
 aaagattatc caccatgatc aagtaggttt catatcaggg atgcagggat tatttaacat
 atgaagtcaa aaaatgtgat acaccacatg aacagaatta ataacaaaat tatatgatca
 tctcaatagt gtacaaaaag cattgataaa atccagcatc tctttatgat taaaaccctt
 agcaaaatcg gcatagaagg gacatacttt aaggcaataa aagccatcta tgagaaaccc
 acactcaata ttatactaaa tgtagaaaag ttgatagtat tccccccaag aactgaaaca
 agacaaggat gcccactttc accacttcta ttcaacaaag tactggaagt attagccaga
 gcaatcagac aagagaaaga aaaaaagggc atctaaatca gtaaagggaa agtcaaactg
 ttgctgttcg ccaatgatat gattatatac ctagaaaacc ctaaagactc atccgaaaag
 cttctagagc tgataaataa attcagtaaa gtatcaggat acaaaatcac tgtacacaaa
 tcagtagcaa tgccatacag caacagtgac caagttggga atcaaatcaa gaactcaacc
 acttttacaa tagctgcaag aaaaataaaa tacttaggaa tatacctaac caaagaggtg
 aaagatctct ataaggaaag ttacaaaaca ctgctgaaat aaatcatcaa tgacacaaac
 aaatggaaac agctcatgct catggatggc tagaatcagc attgtgaaaa tgaccacact
 gccaaaagga atctataatt ttaatgaatt cccatcaaaa taccatcatc attcttcata
 gaactaaaaa atacaatcct aaaatacaca tggaaccaaa aagagtctgc atagccaaag
 aaagactaag caaaaagaac aaatctggag gcatcacgtt atttaacttc aaacaatact
 acaaggctat agttaccaaa acatcatggc actgatataa aagcaggcac atagaccaat
 ggaacaaaat agaaaaccta gaaataaagc caaatactta aagccaactg atctttaaca
 aggcaaacaa aaacataaag tggggaaaaa acaacaaatg gtgctgggat aactggcaag
 tcacatgtag aagaatgaaa ctggatcctc tctctcatct catacaaaaa tcaactcaag
 atggatcaaa gacttaaatc aaagacctga aaccataaaa attctagaag ataacattag
 aaaaactgtt ctagacattg gcttaggcaa ggagtttatg accaagaacc caaaagcaaa
 tataacaaaa acaaagaaaa atagatggga cttaattaaa ctaaaaagct tctgcacagc
 aaaagaaata atcagcagag taaacgggta gcccacagag tgggaaaaaa atcttcacaa
 actatgcttc ttacaaatgg ctaatattca gaatctacaa ggaaatcaaa caaatcagca
 agaaaaaaaa taatcccttc aaaaagtgag ctaaggacat gaatagacaa ttctcaaaag
 aagatacaca aatggccaac aaacatgtga aaaaaaaatg ctaaacatca atagcgatca
 aggaaatgga aatcaaaacc acaatacaat accaccttac tcctgcaaaa atagacatag
 ttaaaaaaaa tgaaatacta

  Submitted Frequency for ss13405790 back to top
There is no frequency submission for ss13405790.


  dbSNP summary of Genotypes for ss13405790 back to top
No sufficient data to compute Hardy-weinberg probability for ss13405790.


  Submitted individual genotype for ss13405790 back to top
There is no individual genotype data for ss13405790.

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