Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004671.15_2760893 | RefSNP(rs#) | rs9633350 | Submitted Batch ID | CHRX_NA11321.2 | Submitted Date | Oct 23, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 23 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004671
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHRX_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | population count: 1 | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:XChr_X_11321_2-287d08.p1kposition:-394quality:46 |
>gnl|dbSNP|ss13405790|allelePos=2000|len=4000|taxid=9606|alleles='A/T'|mol=Genomic GTaattatga gccaataatt ttgtatccag caatgctaag cttcataaat gaaggataga
taaaatcttt ttcagacaaa caaatgttga gagaatttgc cactaccaag tcagcactac
aaaaactact aaaaggaatt ctaaatcttg aaacaaaact tggaatacac caaaatagaa
cctctttaaa gcataagtct cacagggcct ataatactat aacacaatta aaaataaaaa
cagggtattc aggcaacagc tagcatgata aatggaacag tacctgacat cttagtacta
gcattaaatg taaatggcgt aaatgctcca cttaaaaaat acagagtagc agagtggata
aacatccacc aaccaaatat ctgctgtctt caagaaactc aactaacaca gaaggactca
aataaactta atgtaaaggg atagaaaaag attttctatg caaattgaaa aaagtgagca
aaagtaacta ttcttatatc agacaaaaca gactttaatg caacaatagt taaaagagac
aaagagagac attatataat gataacaaca ttttcccaaa aggaaagtat tacaatccta
aatacatatg cacctaacac tggggatccc aaatttatga aacaattact actggacctg
agaaatgaga tagatggcaa cacagtaata gtgggggact tcaatactcc attgacagca
ctacacaggt catcaagaca gaaagtcaac gaagaaacaa aggatctaca tggcctggtg
cggtggttca tgccagtaat cccagcactt tgggaggcca aggtgggtgg atcacaagtt
caggagatcg agaccatcct ggctaactcg gtaaaaccct gtctctacta aaaatacaaa
aacaaaatta gctgggtgtg gttgagggca cctgtatttc cagctactca ggaggctgag
gtgggagaat ggcatgaact tgggagatgg agcttgcagt gagccgagat tgtgccactg
cactccagcc tgggcaacag agtgagactc catctcaaaa aaaaaaaaaa aaaaaaaaaa
aagaaaaaga aaaagaaaaa gaaaaaagaa acaatggatc tacactatac actagaacaa
atggccttaa cagacattta cagaacattc tacccaaaaa ctgcagaata tacattgttt
ttatcagcac ttggaacatt ctccaagaga gaccatatga taggccacaa aaaaagtctc
aatacatttt aaaacattga aattatacca agtactctct cagaccacag tggaataaaa
ttagaaatta actccaaaag gaacacacaa aactagaaaa atagatggaa attaagtaat
ctgctcctga ttgatctttg ggtcaacaat gaaataaaaa tggaaattta aaaattattt
gaactaaatg ataatagtga cacaacctaa gaaaaactct gggatacagc aaaagcagtg
ctaagaggaa agttcatagc attaaatgtc tacatcaaaa agtctgaaag cgaacaaata
gaaaatctaa gctcacacct caaggaacca gagaagcaag aggaaaccaa acagataccc
agcagaagaa aattaacata tctcagagca gaattaatga aattgaagca aaaactacaa
aagataagtg gtcccaaaag ccggttcttt gaaacgataa acaaaataga taaatagtga
gattaatcaa gaaaagaaga gagaagatcc aaataaactc aattaaaaac aaaatgggag
atattatcat caataccaca taaatacaaa ggataattta aggctattat aaacacctta
tttacacaaa ctggaaaacc tagaagagat ggataaattc ctgaaaatac acaaccctcc
aagattaaac cagaagaaac agaaactctg aacagaccaa taacaagtag caagattaaa
acagtaataa taataataa
W
aaaaaaaaac ttgtcaacaa aaaaagtcca ggaccagagg gattcacagc tgaattctat
cagacatgca atggtgatac cattgcatgt ttcagtaggt accaatccta ctgaaactct
tccaaaagat agagtaagag gtaatctctc gtaaatcatt ctatgaatcc agtatcaccc
taatacaaaa cccaggaaag gacattaaaa aaaaaacaac tacagactaa tagcagtgat
gaacatagat gcaagaatcc tcaacaaaaa actagctaaa taaattcaac agcatatcaa
aaagattatc caccatgatc aagtaggttt catatcaggg atgcagggat tatttaacat
atgaagtcaa aaaatgtgat acaccacatg aacagaatta ataacaaaat tatatgatca
tctcaatagt gtacaaaaag cattgataaa atccagcatc tctttatgat taaaaccctt
agcaaaatcg gcatagaagg gacatacttt aaggcaataa aagccatcta tgagaaaccc
acactcaata ttatactaaa tgtagaaaag ttgatagtat tccccccaag aactgaaaca
agacaaggat gcccactttc accacttcta ttcaacaaag tactggaagt attagccaga
gcaatcagac aagagaaaga aaaaaagggc atctaaatca gtaaagggaa agtcaaactg
ttgctgttcg ccaatgatat gattatatac ctagaaaacc ctaaagactc atccgaaaag
cttctagagc tgataaataa attcagtaaa gtatcaggat acaaaatcac tgtacacaaa
tcagtagcaa tgccatacag caacagtgac caagttggga atcaaatcaa gaactcaacc
acttttacaa tagctgcaag aaaaataaaa tacttaggaa tatacctaac caaagaggtg
aaagatctct ataaggaaag ttacaaaaca ctgctgaaat aaatcatcaa tgacacaaac
aaatggaaac agctcatgct catggatggc tagaatcagc attgtgaaaa tgaccacact
gccaaaagga atctataatt ttaatgaatt cccatcaaaa taccatcatc attcttcata
gaactaaaaa atacaatcct aaaatacaca tggaaccaaa aagagtctgc atagccaaag
aaagactaag caaaaagaac aaatctggag gcatcacgtt atttaacttc aaacaatact
acaaggctat agttaccaaa acatcatggc actgatataa aagcaggcac atagaccaat
ggaacaaaat agaaaaccta gaaataaagc caaatactta aagccaactg atctttaaca
aggcaaacaa aaacataaag tggggaaaaa acaacaaatg gtgctgggat aactggcaag
tcacatgtag aagaatgaaa ctggatcctc tctctcatct catacaaaaa tcaactcaag
atggatcaaa gacttaaatc aaagacctga aaccataaaa attctagaag ataacattag
aaaaactgtt ctagacattg gcttaggcaa ggagtttatg accaagaacc caaaagcaaa
tataacaaaa acaaagaaaa atagatggga cttaattaaa ctaaaaagct tctgcacagc
aaaagaaata atcagcagag taaacgggta gcccacagag tgggaaaaaa atcttcacaa
actatgcttc ttacaaatgg ctaatattca gaatctacaa ggaaatcaaa caaatcagca
agaaaaaaaa taatcccttc aaaaagtgag ctaaggacat gaatagacaa ttctcaaaag
aagatacaca aatggccaac aaacatgtga aaaaaaaatg ctaaacatca atagcgatca
aggaaatgga aatcaaaacc acaatacaat accaccttac tcctgcaaaa atagacatag
ttaaaaaaaa tgaaatacta
There is no frequency submission for ss13405790.
No sufficient data to compute Hardy-weinberg probability for ss13405790.
There is no individual genotype data for ss13405790.
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