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Submitted SNP(ss) Details: ss13405828           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004852.15_3581101
RefSNP(rs#)rs9633362
Submitted Batch IDCHRX_NA11321.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XChr_X_11321_2-165f08.p1kposition:721quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13405828|allelePos=2000|len=4000|taxid=9606|alleles='A/T'|mol=Genomic
 acccgcctcg gcctcccaaa gtgctgggat tacaggcgtg agccaccgcg cccggcCtag
 aaggtggttt tataatcatc cataagactc taacaggcat gtttctgata actttggaga
 ctgtgacatc agaatagagg aaagacttct aggactcatg aagagctgaa atgtccatga
 atatcaagca gaacaggaat taactgcatg gactgaacta atagaagact aaagtaatct
 ttttggcttt ttgattaaaa ctttgctggt cctttgtttt gtttttccag agtcaaggaa
 agttttcttt tgagctgttg atagctttta accattatgc atactcctat ggacaaaatt
 tggagcatat ttgtttccgt ctacctgatt tctccagaat ttggaaacta tttgtgtgaa
 tattcttaac ttacagcatg acagttattt gcataagtgc aataagaatc tgttttcatt
 tgtaacagga cacaaatgga gaaactggtt attttaccaa ggtgttgact ggaatggtgt
 gctttccttt aaggaatcaa acttgactta gagacccaat aaaagcccac tgggaaaGAG
 TTTTATAGCT GATTAtaaga cctcttggga gagaatttta tagctgatga taagaccacc
 tagagaggac caaaacaaaa caaaaattgt ctgtggatgg caaaaagttt tagggcagct
 atagttaaag acacaattga cgaggaaatt tgtacctctg tgccatcaga ggtacaaata
 atttaacatc agaattataa ttattactga taaagtacac taattcatat tagaactata
 ggagtttccc ataattttgg aacacatacc gatatcatat ttatccaaat acagcccaaa
 gaaaaccaaa cctcatttca tatttgataa ttcttcctgt ataattttta taccaaatag
 gccaaattat gtcatttttg gactttaggg aacctaatat cttaaatgat taattgggtc
 agaaaaatgc ataatttata atttgatttt ggaaagtctg ccaaatatca agggtttaaa
 acacttcata tcacaaaata agatcacaca ttttttgtaa aataagtcat tcatttaacc
 aaagtgataa ctcaaggatt tcaaaaaagg tgaaaacctt cattttttga aaaagcagac
 ttaattttcc aaacaataag ccccaataaa aacagcatga agccaattaa gtttgttttt
 caaacgttat aaagtctata acattttaat cttgactgta agatttaact tccataagcc
 ttttgtagcc tttataacct ttgttaagga gtcagttagt gcatcaagga aaccttgtta
 atctgacaca gaggcccaca tactgttctt acatcgtgtg cctttgacat taattattaa
 attatagaga aactgaactt attttgtctc tcaaaattgg cccttacaat cccacacatc
 cacctcttcc tcaatagtcc ttgggccttg aggagttgaa aaactttaat ttttggcccc
 atgtctcagg aattaggttt attttCTAAA ATTGTTATTT TAttttattt ttccataagt
 tattggggta caggtggtat ttggttacat gagtaatttc tttagtgtct atttgtgaga
 ttttcatgca cccatcaccc gagcagtata cactgcacca catttgttgt cttttatctc
 tcgccccctc ccactcttcc ccccaagtcc ccaaagtcca ttgtatcatt cttatgcctt
 gtgtccttgt agcttaactc ccacatatta gcgagaacat atgatgtttg gttttccatt
 cctgagttac ttcacttaga ataatagtct ccaatctcat ccaggtcatt gcaaattctg
 ttaattcatt catttttatg gcttagtagt ccatcatata tatatatata tatatatata
 tatatatata tatatatat
 W
 tatatttata tatatatata ttaatatata ttatatataa aaatatataa aatttatata
 tataatttat atatataaaa atatataaaa tttatatata taatttatat atataaaaat
 atataaaatt tatatatata atttatatat ataaaaatat ataaaattta tatatataat
 ttatatatat aaaaatatat aaaatttata tatataattt atatatataa aaatatataa
 aatttatata tataatttat atatataaaa atatataaaa tttatatata taatttatat
 atataaaata tataaattat atatataatt atatatataa tataaaatta tatatataat
 tatatatata atataaaatt atatatataa ttatatatat aatataaaat tatatatata
 ttgtatatat ataaaatata caaaatttat atatataaaa tataaaatat acataaaaat
 aaatatatat aatttatata taaataatat atatatacat atataaatac atatatatat
 atgtatatat atacaccaca gtttctttat ccactcattg attgatgggc atttgggttg
 gttccatgat tttggtattg tgaattgtgc tgctataaac atgcatgtgc aagtatcttt
 tttgaataat gacttctttt cctctgagta gatacccagt aatgggatag atggatcaaa
 tagtagttct acttttagtt ctttaaggag tctccgcact gttttccata gtgggtgcac
 tagtttacat tcccaccagc agtgtagaag tgttccctga accccacatc catgccaaca
 tctactgttt tttgactctt tgattatggc cattcttgca ggagtaaggt ggtatcacat
 tgcgggtttg atttacattt ccctgatcat tagtaatgtt gagcattttt tcatatgttt
 gttgtcattt gtatatcttc ttttgagaac tatctattca tgtccttagc ccactttttg
 atgggattga ttgttttttt tcttactgac ttgtttcagt tcattgtaga ttctcgatgt
 tagtcctttg tcagacatac agattgtgaa gatttcctcc cactctgtgg gttgtctatt
 tactctgctg actgttcctt ttgctgtgca aaagctcttt agtttaatta ggtcccagct
 atttatcttt gtttttattg caattgcttt tgggtttttg gtcatgaaat ccttgcctag
 gtcattgttt agaagggttt ttccaatgtt atcttctaga atttttatag tttcaagtct
 TAGtgtgtct ggaattggta ggttcttggt ctcactgact tcatgaatga agccgcggac
 cctcgcagtg agtgttacag ctcttaaggt ggcgcgtctg gagtttgttc cttctgctgt
 tcggatgtgt ttggagtttc ttccttctgc tgggttcatg gtctcgctgg ctcaggagtg
 aagctgcaga ccttcatggt gagtgttaca gctcttaagg ctgcatgtct ggagttgttc
 attcctcccg gtgggctcgt tgtcttgctg gcttcaggag tgaagctgca gaccttcgcg
 gtgagtgtta cagctcataa aagcagcgtg gacccaaaga gtgagcagta gcaagattta
 ttgcaaagag cgaaagaaca agcttccaca gtgtggaagg ggacccgagc gggttgccac
 tgctggctgg ggcagcctac ttttattctc ttatctggcc ccacccacat cctgctgatt
 ggtagagcca agtggtctgt tttgacaggg tgctgattgg tgcatttaca atccctgagc
 tagacacaga ggttctccat gtcctcacca gattagctag atacagagtg tggacacaaa
 ggttctccaa ggccccacca gagtaactag atacagagtg tcgattggtg cattcacaaa
 ccctgagcta gacacagggt

  Submitted Frequency for ss13405828 back to top
There is no frequency submission for ss13405828.


  dbSNP summary of Genotypes for ss13405828 back to top
No sufficient data to compute Hardy-weinberg probability for ss13405828.


  Submitted individual genotype for ss13405828 back to top
There is no individual genotype data for ss13405828.

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