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Submitted SNP(ss) Details: ss13405829           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004852.15_3581107
RefSNP(rs#)rs9633363
Submitted Batch IDCHRX_NA11321.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XChr_X_11321_2-165f08.p1kposition:727quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13405829|allelePos=2000|len=4000|taxid=9606|alleles='T/A'|mol=Genomic
 ctcggcctcc caaagtgctg ggattacagg cgtgagccac cgcgcccggc Ctagaaggtg
 gttttataat catccataag actctaacag gcatgtttct gataactttg gagactgtga
 catcagaata gaggaaagac ttctaggact catgaagagc tgaaatgtcc atgaatatca
 agcagaacag gaattaactg catggactga actaatagaa gactaaagta atctttttgg
 ctttttgatt aaaactttgc tggtcctttg ttttgttttt ccagagtcaa ggaaagtttt
 cttttgagct gttgatagct tttaaccatt atgcatactc ctatggacaa aatttggagc
 atatttgttt ccgtctacct gatttctcca gaatttggaa actatttgtg tgaatattct
 taacttacag catgacagtt atttgcataa gtgcaataag aatctgtttt catttgtaac
 aggacacaaa tggagaaact ggttatttta ccaaggtgtt gactggaatg gtgtgctttc
 ctttaaggaa tcaaacttga cttagagacc caataaaagc ccactgggaa aGAGTTTTAT
 AGCTGATTAt aagacctctt gggagagaat tttatagctg atgataagac cacctagaga
 ggaccaaaac aaaacaaaaa ttgtctgtgg atggcaaaaa gttttagggc agctatagtt
 aaagacacaa ttgacgagga aatttgtacc tctgtgccat cagaggtaca aataatttaa
 catcagaatt ataattatta ctgataaagt acactaattc atattagaac tataggagtt
 tcccataatt ttggaacaca taccgatatc atatttatcc aaatacagcc caaagaaaac
 caaacctcat ttcatatttg ataattcttc ctgtataatt tttataccaa ataggccaaa
 ttatgtcatt tttggacttt agggaaccta atatcttaaa tgattaattg ggtcagaaaa
 atgcataatt tataatttga ttttggaaag tctgccaaat atcaagggtt taaaacactt
 catatcacaa aataagatca cacatttttt gtaaaataag tcattcattt aaccaaagtg
 ataactcaag gatttcaaaa aaggtgaaaa ccttcatttt ttgaaaaagc agacttaatt
 ttccaaacaa taagccccaa taaaaacagc atgaagccaa ttaagtttgt ttttcaaacg
 ttataaagtc tataacattt taatcttgac tgtaagattt aacttccata agccttttgt
 agcctttata acctttgtta aggagtcagt tagtgcatca aggaaacctt gttaatctga
 cacagaggcc cacatactgt tcttacatcg tgtgcctttg acattaatta ttaaattata
 gagaaactga acttattttg tctctcaaaa ttggccctta caatcccaca catccacctc
 ttcctcaata gtccttgggc cttgaggagt tgaaaaactt taatttttgg ccccatgtct
 caggaattag gtttattttC TAAAATTGTT ATTTTAtttt atttttccat aagttattgg
 ggtacaggtg gtatttggtt acatgagtaa tttctttagt gtctatttgt gagattttca
 tgcacccatc acccgagcag tatacactgc accacatttg ttgtctttta tctctcgccc
 cctcccactc ttccccccaa gtccccaaag tccattgtat cattcttatg ccttgtgtcc
 ttgtagctta actcccacat attagcgaga acatatgatg tttggttttc cattcctgag
 ttacttcact tagaataata gtctccaatc tcatccaggt cattgcaaat tctgttaatt
 cattcatttt tatggcttag tagtccatca tatatatata tatatatata tatatatata
 tatatatata tatatatat
 W
 tatatatata tatattaata tatattatat ataaaaatat ataaaattta tatatataat
 ttatatatat aaaaatatat aaaatttata tatataattt atatatataa aaatatataa
 aatttatata tataatttat atatataaaa atatataaaa tttatatata taatttatat
 atataaaaat atataaaatt tatatatata atttatatat ataaaaatat ataaaattta
 tatatataat ttatatatat aaaaatatat aaaatttata tatataattt atatatataa
 aatatataaa ttatatatat aattatatat ataatataaa attatatata taattatata
 tataatataa aattatatat ataattatat atataatata aaattatata tatattgtat
 atatataaaa tatacaaaat ttatatatat aaaatataaa atatacataa aaataaatat
 atataattta tatataaata atatatatat acatatataa atacatatat atatatgtat
 atatatacac cacagtttct ttatccactc attgattgat gggcatttgg gttggttcca
 tgattttggt attgtgaatt gtgctgctat aaacatgcat gtgcaagtat cttttttgaa
 taatgacttc ttttcctctg agtagatacc cagtaatggg atagatggat caaatagtag
 ttctactttt agttctttaa ggagtctccg cactgttttc catagtgggt gcactagttt
 acattcccac cagcagtgta gaagtgttcc ctgaacccca catccatgcc aacatctact
 gttttttgac tctttgatta tggccattct tgcaggagta aggtggtatc acattgcggg
 tttgatttac atttccctga tcattagtaa tgttgagcat tttttcatat gtttgttgtc
 atttgtatat cttcttttga gaactatcta ttcatgtcct tagcccactt tttgatggga
 ttgattgttt tttttcttac tgacttgttt cagttcattg tagattctcg atgttagtcc
 tttgtcagac atacagattg tgaagatttc ctcccactct gtgggttgtc tatttactct
 gctgactgtt ccttttgctg tgcaaaagct ctttagttta attaggtccc agctatttat
 ctttgttttt attgcaattg cttttgggtt tttggtcatg aaatccttgc ctaggtcatt
 gtttagaagg gtttttccaa tgttatcttc tagaattttt atagtttcaa gtctTAGtgt
 gtctggaatt ggtaggttct tggtctcact gacttcatga atgaagccgc ggaccctcgc
 agtgagtgtt acagctctta aggtggcgcg tctggagttt gttccttctg ctgttcggat
 gtgtttggag tttcttcctt ctgctgggtt catggtctcg ctggctcagg agtgaagctg
 cagaccttca tggtgagtgt tacagctctt aaggctgcat gtctggagtt gttcattcct
 cccggtgggc tcgttgtctt gctggcttca ggagtgaagc tgcagacctt cgcggtgagt
 gttacagctc ataaaagcag cgtggaccca aagagtgagc agtagcaaga tttattgcaa
 agagcgaaag aacaagcttc cacagtgtgg aaggggaccc gagcgggttg ccactgctgg
 ctggggcagc ctacttttat tctcttatct ggccccaccc acatcctgct gattggtaga
 gccaagtggt ctgttttgac agggtgctga ttggtgcatt tacaatccct gagctagaca
 cagaggttct ccatgtcctc accagattag ctagatacag agtgtggaca caaaggttct
 ccaaggcccc accagagtaa ctagatacag agtgtcgatt ggtgcattca caaaccctga
 gctagacaca gggtgctgat

  Submitted Frequency for ss13405829 back to top
There is no frequency submission for ss13405829.


  dbSNP summary of Genotypes for ss13405829 back to top
No sufficient data to compute Hardy-weinberg probability for ss13405829.


  Submitted individual genotype for ss13405829 back to top
There is no individual genotype data for ss13405829.

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