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Submitted SNP(ss) Details: ss13405830           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004852.15_3581114
RefSNP(rs#)rs9633364
Submitted Batch IDCHRX_NA11321.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XChr_X_11321_2-165f08.p1kposition:734quality:27

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13405830|allelePos=2000|len=4000|taxid=9606|alleles='T/A'|mol=Genomic
 tcccaaagtg ctgggattac aggcgtgagc caccgcgccc ggcctagaag gtggttttat
 aatcatccat aagactctaa caggcatgtt tctgataact ttggagactg tgacatcaga
 atagaggaaa gacttctagg actcatgaag agctgaaatg tccatgaata tcaagcagaa
 caggaattaa ctgcatggac tgaactaata gaagactaaa gtaatctttt tggctttttg
 attaaaactt tgctggtcct ttgttttgtt tttccagagt caaggaaagt tttcttttga
 gctgttgata gcttttaacc attatgcata ctcctatgga caaaatttgg agcatatttg
 tttccgtcta cctgatttct ccagaatttg gaaactattt gtgtgaatat tcttaactta
 cagcatgaca gttatttgca taagtgcaat aagaatctgt tttcatttgt aacaggacac
 aaatggagaa actggttatt ttaccaaggt gttgactgga atggtgtgct ttcctttaag
 gaatcaaact tgacttagag acccaataaa agcccactgg gaaaGAGTTT TATAGCTGAT
 TAtaagacct cttgggagag aattttatag ctgatgataa gaccacctag agaggaccaa
 aacaaaacaa aaattgtctg tggatggcaa aaagttttag ggcagctata gttaaagaca
 caattgacga ggaaatttgt acctctgtgc catcagaggt acaaataatt taacatcaga
 attataatta ttactgataa agtacactaa ttcatattag aactatagga gtttcccata
 attttggaac acataccgat atcatattta tccaaataca gcccaaagaa aaccaaacct
 catttcatat ttgataattc ttcctgtata atttttatac caaataggcc aaattatgtc
 atttttggac tttagggaac ctaatatctt aaatgattaa ttgggtcaga aaaatgcata
 atttataatt tgattttgga aagtctgcca aatatcaagg gtttaaaaca cttcatatca
 caaaataaga tcacacattt tttgtaaaat aagtcattca tttaaccaaa gtgataactc
 aaggatttca aaaaaggtga aaaccttcat tttttgaaaa agcagactta attttccaaa
 caataagccc caataaaaac agcatgaagc caattaagtt tgtttttcaa acgttataaa
 gtctataaca ttttaatctt gactgtaaga tttaacttcc ataagccttt tgtagccttt
 ataacctttg ttaaggagtc agttagtgca tcaaggaaac cttgttaatc tgacacagag
 gcccacatac tgttcttaca tcgtgtgcct ttgacattaa ttattaaatt atagagaaac
 tgaacttatt ttgtctctca aaattggccc ttacaatccc acacatccac ctcttcctca
 atagtccttg ggccttgagg agttgaaaaa ctttaatttt tggccccatg tctcaggaat
 taggtttatt ttCTAAAATT GTTATTTTAt tttatttttc cataagttat tggggtacag
 gtggtatttg gttacatgag taatttcttt agtgtctatt tgtgagattt tcatgcaccc
 atcacccgag cagtatacac tgcaccacat ttgttgtctt ttatctctcg ccccctccca
 ctcttccccc caagtcccca aagtccattg tatcattctt atgccttgtg tccttgtagc
 ttaactccca catattagcg agaacatatg atgtttggtt ttccattcct gagttacttc
 acttagaata atagtctcca atctcatcca ggtcattgca aattctgtta attcattcat
 ttttatggct tagtagtcca tcatatatat atatatatat atatatatat atatatatat
 atatatatat atttatata
 W
 atatatatta atatatatta tatataaaaa tatataaaat ttatatatat aatttatata
 tataaaaata tataaaattt atatatataa tttatatata taaaaatata taaaatttat
 atatataatt tatatatata aaaatatata aaatttatat atataattta tatatataaa
 aatatataaa atttatatat ataatttata tatataaaaa tatataaaat ttatatatat
 aatttatata tataaaaata tataaaattt atatatataa tttatatata taaaatatat
 aaattatata tataattata tatataatat aaaattatat atataattat atatataata
 taaaattata tatataatta tatatataat ataaaattat atatatattg tatatatata
 aaatatacaa aatttatata tataaaatat aaaatataca taaaaataaa tatatataat
 ttatatataa ataatatata tatacatata taaatacata tatatatatg tatatatata
 caccacagtt tctttatcca ctcattgatt gatgggcatt tgggttggtt ccatgatttt
 ggtattgtga attgtgctgc tataaacatg catgtgcaag tatctttttt gaataatgac
 ttcttttcct ctgagtagat acccagtaat gggatagatg gatcaaatag tagttctact
 tttagttctt taaggagtct ccgcactgtt ttccatagtg ggtgcactag tttacattcc
 caccagcagt gtagaagtgt tccctgaacc ccacatccat gccaacatct actgtttttt
 gactctttga ttatggccat tcttgcagga gtaaggtggt atcacattgc gggtttgatt
 tacatttccc tgatcattag taatgttgag cattttttca tatgtttgtt gtcatttgta
 tatcttcttt tgagaactat ctattcatgt ccttagccca ctttttgatg ggattgattg
 ttttttttct tactgacttg tttcagttca ttgtagattc tcgatgttag tcctttgtca
 gacatacaga ttgtgaagat ttcctcccac tctgtgggtt gtctatttac tctgctgact
 gttccttttg ctgtgcaaaa gctctttagt ttaattaggt cccagctatt tatctttgtt
 tttattgcaa ttgcttttgg gtttttggtc atgaaatcct tgcctaggtc attgtttaga
 agggtttttc caatgttatc ttctagaatt tttatagttt caagtctTAG tgtgtctgga
 attggtaggt tcttggtctc actgacttca tgaatgaagc cgcggaccct cgcagtgagt
 gttacagctc ttaaggtggc gcgtctggag tttgttcctt ctgctgttcg gatgtgtttg
 gagtttcttc cttctgctgg gttcatggtc tcgctggctc aggagtgaag ctgcagacct
 tcatggtgag tgttacagct cttaaggctg catgtctgga gttgttcatt cctcccggtg
 ggctcgttgt cttgctggct tcaggagtga agctgcagac cttcgcggtg agtgttacag
 ctcataaaag cagcgtggac ccaaagagtg agcagtagca agatttattg caaagagcga
 aagaacaagc ttccacagtg tggaagggga cccgagcggg ttgccactgc tggctggggc
 agcctacttt tattctctta tctggcccca cccacatcct gctgattggt agagccaagt
 ggtctgtttt gacagggtgc tgattggtgc atttacaatc cctgagctag acacagaggt
 tctccatgtc ctcaccagat tagctagata cagagtgtgg acacaaaggt tctccaaggc
 cccaccagag taactagata cagagtgtcg attggtgcat tcacaaaccc tgagctagac
 acagggtgct gattggtgtG

  Submitted Frequency for ss13405830 back to top
There is no frequency submission for ss13405830.


  dbSNP summary of Genotypes for ss13405830 back to top
No sufficient data to compute Hardy-weinberg probability for ss13405830.


  Submitted individual genotype for ss13405830 back to top
There is no individual genotype data for ss13405830.

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