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Submitted SNP(ss) Details: ss13505191           
Submitter
HandleSC_JCM
Submitter SNP IDchr1.NT_034471.3_44006
RefSNP(rs#)rs9701779
Submitted Batch IDTSC_200310
Submitted DateOct 31, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 31 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC_200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityjco03f10.g1 500 44

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13505191|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 CCACAGAAGC TGCCATCAAG TATTTCCTCA CGCAAGCAAC CGCATCCATA ATCCTTCTAA
 TAGCTATCCT CTTCAACAAT ATACTCTCCG GACAATGAAC CATAACCAAT ACCACCAATC
 AATACTCATC ATTAATAATC ATAATGGCTA TAGCAATAAA ACTAGGAATA GCCCCCTTTC
 ACTTCTGAGT CCCAGAGGTT
 R
 CCCAAGGCAC CCCTCTGACA TCCGGCCTGC TCCTTCTCAC ATGACAAAAA CTAGCCCCCA
 TCTCAATCAT ATACCAAATT TCTCCCTCAT TAAACGTAAG CCTTCTCCTC ACTCTTTCAA
 TCTTATCCAT CATGGCAGGC AGTTGAGGTG GATTAAACCA AACCCAACTA CGCAAAATCT
 TAGCATACTC CTCAATTACC

  Submitted Frequency for ss13505191 back to top
There is no frequency submission for ss13505191.


  dbSNP summary of Genotypes for ss13505191 back to top
No sufficient data to compute Hardy-weinberg probability for ss13505191.


  Submitted individual genotype for ss13505191 back to top
There is no individual genotype data for ss13505191.