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Submitted SNP(ss) Details: ss1367645251           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_1205
RefSNP(rs#)rs199745078
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed Allele-/TC
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1367645251|allelePos=26|len=51|taxid=9606|alleles='-/TC'|mol=Genomic
 GTGTGTGTGT ATGTGTGTGT GTGTG
 N
 TGTGTGAAAG ACAGAAGAAA GAGGG

  Submitted Frequency for ss1367645251 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694-=0.92360002
TC=0.07640000
Phase3_V1-AMR1000GENOMES
AFR1322-=0.87970001
TC=0.12030000
Phase3_V1-AFR1000GENOMES
EAS1008-=0.76590002
TC=0.23410000
Phase3_V1-EAS1000GENOMES
SAS978-=0.88139999
TC=0.11860000
Phase3_V1-SAS1000GENOMES
EUR1006-=0.87080002
TC=0.12920000
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1367645251 back to top
No sufficient data to compute Hardy-weinberg probability for ss1367645251.


  Submitted individual genotype for ss1367645251 back to top
There is no individual genotype data for ss1367645251.