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Submitted SNP(ss) Details: ss1367645377           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_4005
RefSNP(rs#)rs59306077
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed AlleleAT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1367645377|allelePos=26|len=51|taxid=9606|alleles='AT/-'|mol=Genomic
 GCAAAGCATA TGGCTCTGGT GAGAC
 N
 GTGTGAGGAG CTGAGAATGA GACGG

  Submitted Frequency for ss1367645377 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694AT=0.83139998
-=0.16859999
Phase3_V1-AMR1000GENOMES
AFR1322AT=0.50680000
-=0.49320000
Phase3_V1-AFR1000GENOMES
EAS1008AT=0.89579999
-=0.10420000
Phase3_V1-EAS1000GENOMES
SAS978AT=0.82720000
-=0.17280000
Phase3_V1-SAS1000GENOMES
EUR1006AT=0.87570000
-=0.12430000
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1367645377 back to top
No sufficient data to compute Hardy-weinberg probability for ss1367645377.


  Submitted individual genotype for ss1367645377 back to top
There is no individual genotype data for ss1367645377.