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Submitted SNP(ss) Details: ss13896161           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr1.NT_077911.1_3758
RefSNP(rs#)rs10047118
Submitted Batch IDWIBR_S224_SNPS_200310
Submitted DateNov 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome 5 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_S224_SNPS_200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS224P6903FH1.T0 170 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13896161|allelePos=501|len=1001|taxid=9606|alleles='T/G'|mol=Genomic
 AGAATTTATG CTACAAATTA CGatggtttg gatgtggttt gtccccacaa aaactcatgt
 tgaaatttga ctcccactgt gtcagtgtgg ggcggtgggg cctagtggac ggtgtttggg
 tcgtggggac ggatccctca tgaaaggatt aatgtcctcc atgggggtga gtgagttctg
 ttctcacagg aatagataat tcctgcagga gcaggtaatt aaaaagagtc tggcttcctt
 ggcttccctc ttgctttcac ttctgctatg tgatctctgg tgcacccctt gctccccttc
 cactttccac catgaggtga aaaagactga ggccccgcca gatgcaactg cccaatctca
 gacattccag ccaccagtat tgtgaaccaa atgaaacttt tttacttata aattacgcag
 cctcaggtat tctgttacag aagcacaaaa tggactaaga caCAAatcta ggtaaaaact
 ttgaaaatga atagaatctg
 K
 aggctgaagg cacatgaact atacttcatt attggattcc attttataaa gttctttcca
 acagaagcaa ttgtgaacaa ttgtaaaacc acagtgtctg tatctggagt aaaacaatga
 cttacataag tcgcagatgg tgggaaccag ctttctcact gttgaagtgg gaggttacaa
 attagcaaga cgagaaggct agaatgattc ctgtgatagt agatcagagg tggagacatc
 aacgtaaact tatgcttagt ttaatataga tacacacagt tctacataga aaactttata
 attaggtgtg tgtaggtagg ttagacacgc acatatactt cctagcattg ctaatgaggg
 acaagataca atgTGCATTC AGCAGCCACA TGTAAGTTTT CCCACCATTC TGAAAGGAAT
 CAGGCTCTTT GAAGAAATGT CTGATACTAG AACTGGGACA GTAAATATAG GAGCCAGGAT
 AATCTGGAAG TATCAGAAAG

  Submitted Frequency for ss13896161 back to top
There is no frequency submission for ss13896161.


  dbSNP summary of Genotypes for ss13896161 back to top
No sufficient data to compute Hardy-weinberg probability for ss13896161.


  Submitted individual genotype for ss13896161 back to top
There is no individual genotype data for ss13896161.