>gnl|dbSNP|ss1396604|allelePos=559|len=618|taxid=9606|alleles='C/T'|mol=Genomic
GGATCTTCCT CTGAAGGGaa aatattttta aaaataaaaa aattattttt aaCATAACTC
AATTATTTAA ATGAGGATCA ATTCAAAGCA GGTGACATGA ATTTTGCCCA AATCGGGGCT
TTGGCCACTT TGTCCTTTAT ATGCAAGACG CTACCAGATA ATGTATTGCA AATTACTTCA
GGGTTTAGGA ATCCTAGTTG TATTTGTACA TAGGTGCTGT GTTTTCTTCT AGGCAGTCTT
GACCCAAAGA TTTATATTCT TGTTTACACA TTTTATTTTT CCACAGATAC TTAACCAACC
TGACCTCACT TGTTGAGTAT TTGTTTGTGA GATTCTTTAG CAAAGCTGCC CACACAAAGA
AAAATTCAGG AGCATTTACA GAGGAAAGTT AAGTACCTAG AATTCCNAGA TACGTTCTAT
ACAAATACTT GACTTTATGC AACCTTCACC TAATATATCT GACTTATGTT TACCAATTTA
TATTAATATT CATTTTGCAT TTCATTGCAG CTTATCAAAT TGTTATAGAC TTTAAGCCTC
ACTGTTTTCC CGGTCAAC
Y
GTGCCAAAAT TTTCTTATAA TAAGGAACTT TTCCAACTAA TTGATAGAGG TAGCAATTA
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.90265489
| T=0.09734514 | C/C=0.80530971
C/T=0.19469027
| Pr(chiSq=0.243,df=1)
=0.655 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.91860467
| T=0.08139535 | C/C=0.83720928
C/T=0.16279070
| Pr(chiSq=0.053,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 168 | 168 | C=0.95833331
| T=0.04166667 | C/C=0.91666669
C/T=0.08333334
| Pr(chiSq=0.013,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.98672569
| T=0.01327434 | C/C=0.97345132
C/T=0.02654867
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | C=0.93877554
| T=0.06122449 | C/C=0.87755102
C/T=0.12244898
| Pr(chiSq=0.025,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.95121950
| T=0.04878049 | C/C=0.90243900
C/T=0.09756097
| Pr(chiSq=0.010,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHD | 168 | 168 | C=0.95238096
| T=0.04761905 | C/C=0.90476191
C/T=0.09523810
| Pr(chiSq=0.020,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.94886363
| T=0.05113636 | C/C=0.89772725
C/T=0.10227273
| Pr(chiSq=0.025,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.98333335
| T=0.01666667 | C/C=0.96666664
C/T=0.03333334
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.94000000
| T=0.06000000 | C/C=0.88000000
C/T=0.12000000
| Pr(chiSq=0.024,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.96853149
| T=0.03146853 | C/C=0.93706292
C/T=0.06293707
| Pr(chiSq=0.009,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.93181819
| T=0.06818182 | C/C=0.86363637
C/T=0.13636364
| Pr(chiSq=0.062,df=1)
=1.000 | Genotype
Freq. |
