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Submitted SNP(ss) Details: ss14252226           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr1.NT_077402.1_77053
RefSNP(rs#)rs1524602
Submitted Batch IDBCM_HTWD_SNPS_200310
Submitted DateNov 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome 16 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBCM_HTWD_SNPS_200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality63563802 225 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14252226|allelePos=501|len=949|taxid=9606|alleles='G/A'|mol=Genomic
 TGTCTATACA TATCCTATCT ATACATATTG AGGATTAACA GGTGCTAGTA GAAAATATTA
 ACTTTCTTTG TATTAACAGG TGTTAGTAGA AAGTAGTAGT AGGTGCTAAG ATAAAAGCCA
 TAATTAAACC TCCTGGTGAA TGAACACACC ATCACCTACA ATCTTACCAA AAATAGAATC
 AAGCACGTGT CCTAGTCAAA CCTCTGGATT CAACTGTCAT TTGGATAAAA CGCAAAGGAT
 AGTGAAAATG TCGATCTTCA CTGAGAGTCT AACCAGCAAA TTTCACAGTG TGGACATCAA
 GTGACAAAAA TCCCAAATTT TTCAACAAAT ATATTGTATG GGAAAGAAAA CTTTGAAAAG
 AAACCTGTAT GTTAGAAGAG ATTTTAAAAA CATGACAAAT GAAAAAAAAT GGGCAAGACT
 AAAACTTTTA AAAAAGtttg agacagggtc tcactctgtc acccaggctg gagtgcagtg
 gtgtgaccat ggctcactgt
 R
 gcctcaacct cctggctcaa gtgatcctac cacctcagtc ttccatgtag ctgggactac
 agctgcgtgc caccacatct ggctcatttt tttttctttt ttaagtagag acggggactt
 gctatgttgc ccaggctagt ctcaaactcc taagcacaag cgatcctccc gcctcggccc
 ctgaaagtgc tgggattgca ggcatgagcc accacacccg gccAAAAGTT GCTTTTGAGG
 AGTTATTGCT GTGTGGATGT GATATAACCC TTTCTGTCAT CTCTTCACAA AACTTTCTGT
 AAAACATAAA AATCACCTGG ACCTTCAGAG ATGAGTTTGt ttattttttt attttttaaa
 aaattGCTAA TTTACAGAAC ATGGAGATGA GTATGTTTTG AAGGCTTGGA AGCATGCAAG
 TGGGAGAAGA AAGGAGTCAG CTACATTC

  Submitted Frequency for ss14252226 back to top
There is no frequency submission for ss14252226.


  dbSNP summary of Genotypes for ss14252226 back to top
No sufficient data to compute Hardy-weinberg probability for ss14252226.


  Submitted individual genotype for ss14252226 back to top
There is no individual genotype data for ss14252226.