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Submitted SNP(ss) Details: ss14421886           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr10.NT_030059.11_8469423
RefSNP(rs#)rs555895
Submitted Batch IDWIBR_S228_SNPS_200310
Submitted DateNov 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome Y reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_S228_SNPS_200310
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS228P7266FB5.T0 -421 51S228P7266FC5.T0 -389 51S228P718FB5.T0 -494 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14421886|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 CTCAGAAAAA GTAGAAAATG GAAGTCTATG TGATCAAGAA ATCGATAGCA TTTGCAGTAT
 AGAGCGTGCA GATAATGACA AGGAATATCT AGTACTTACT TTAACAAAAA ATGATCTTGA
 CAAAGCAAAT AAAGACAAAG CCAACCGATA CTTTTCTCCA AATTTTAAGG TCAGTTAAAT
 TAAACATTTT GTGGGGGTTG
 K
 TGACTTGTAT GTATGTGATG TGTGTTTAAT TCTAGGAGTA CAGCTGATGA AGAACTTGCT
 TGACAAGTTT TTAACTTATG TATTATTTCG AAGCAGTGTT TACGTAGCAG TAACATGAAA
 GTTTCTAATA AAATACCCAA TGTACACAGC GTCAAAAAAG CTGCATTTTT CCTTTTCCTA
 ATTCTTCGTT GTTTGCTGAA

  Submitted Frequency for ss14421886 back to top
There is no frequency submission for ss14421886.


  dbSNP summary of Genotypes for ss14421886 back to top
No sufficient data to compute Hardy-weinberg probability for ss14421886.


  Submitted individual genotype for ss14421886 back to top
There is no individual genotype data for ss14421886.