NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss14574621           
Submitter
HandleWUGSC_SSAHASNP
Submitter SNP IDchr7.NT_007819.14_24311570
RefSNP(rs#)rs158
Submitted Batch IDWUGSC_WUchr7_SNPS_200310
Submitted DateNov 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome 7 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWUGSC_WUCHR7_SNPS_200310
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualitytlc34f08.g1 -570 68tlp81d03.b1 -744 59

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14574621|allelePos=225|len=593|taxid=9606|alleles='C/T'|mol=Genomic
 ACAGGTTAAC CTGCTGGACC CTCAATTTCC CATCTGGTTA AAAATACCTA GCTAACAGAC
 TTCTGTAAGT TTAATGCGGT AATGTACAAA AGTTCCTAGT ATTGCTATTT GTTAATTTTC
 CCAACAGTAA AAAAAGGATA AAGATGAAAA TCAAAATCAG CTATGAAATC CTCATTCCTC
 ATATTTACAG AGAAGGTTTC ATTTATTCAT TCTATAAATG TTTA
 Y
 TGCAAACCTA CTGCGTGTTC TTGACACAGG GGATCAAGTG ATGAACAAGA CAGACAAGGT
 CTCTGCATTC CTGGTACTTA CATCCTAATG AGGGAAGGCA GATAACCCAA TAACCCAAAG
 AGACAATTTC AGAGAGAAAT TTAAGTGCTA TGAGCAACAG CAAACGGGTG ATGTGGCTTG
 GCTGGAGGGG ATGGTCATTT AGCTTGGATG CATAAGAACC TAGGCCTGCT TGACTGATCT
 CCTTTAGCCA AGTATAGTCC TTTAGCCAAG GACCTCACCT TGTATGATAC TTGCGGGGTA
 CAGTGCAGAT GATGAGAAGC CAGGCCTTCG CTTTCACCCA TCTGTGGAAG TATCTCTTTT
 GCAGCTGT

  Submitted Frequency for ss14574621 back to top
There is no frequency submission for ss14574621.


  dbSNP summary of Genotypes for ss14574621 back to top
No sufficient data to compute Hardy-weinberg probability for ss14574621.


  Submitted individual genotype for ss14574621 back to top
There is no individual genotype data for ss14574621.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement