| Submitter | | Handle | BCM_SSAHASNP | | Submitter SNP ID | chr1.NT_077402.1_45162 | | RefSNP(rs#) | rs10399749 | | Submitted Batch ID | BCM_HTWF_SNPS_200310 | | Submitted Date | Nov 10, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome 19 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Nov 10 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077402
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | BCM_HTWF_SNPS_200310 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 4 | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position quality65164897 495 51 |
>gnl|dbSNP|ss14687333|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic TTTCATtctt tctttctttt ttaaggggca gggtctcact atgttgctga ggctggtctc
aaactcctga cctcaagcaa tctgtctgct tcagcctccc aagtagctga gaatacaggg
acaagccatt gcacctgacC CTGGTACTAT TTCTTGAGTT CCTGATCCAC AGATCTAACC
TCCTACTTTC CTGGATGCCA CACAAGATCT TCCACTCAAC AAGTCTGCAA CTAAACTAGC
CTTCCTCTTT TCAAACCTAC TCTTCTTTCA GTGTTCTCAG TCACAATAAT TTGTACCAAC
TAGTTACCTA GTTGCACAAC CCAAAATCTG GGAAAAATAA TAGATTTCTT TCTCCATAGT
ACCCCCAAAT CAATAAATCA TCAAGTCTTA TTCTACCTTC CAAAGAGCCT TACATATGTT
CCTTTATTTT CATCTGTAAC ACCACTATTC CTGTCTAAGC CTACCTATGT CATTTTTGGA
AGAGAATATA GTCACCTATG
Y
GACCTTCCCA CTTAAAATCC TACTATTTAC GCTTCAGTAA AAGAAAAAAA ATTTTTAATC
TAAGTATGTA ATTCTTTTGC TGAAGACACT TCACTTGCTT CTGTGCCCTT AAACTGGTAT
GTTATCATGG TATAGTAGGC CATCCAAGAC CTGGCTTCCT TCCTTTTTTT CAGTCTCAGA
GAATAACATA CTCTTTCCCT GCAACTCCAG ATCCAATTTG GTTTTCTTTT ACTTGCCTGG
AAACTCCAAA ATCTATCAAC TCTGGGGCTT TCCACTAGCT AATCATTTTG TATACAATAT
TTGTCCTTCA TGTTTTGCCT CTTAACATCT CAGCTTTCAG TTTCATCATT TTACCAGGGA
GGCCTCCCAG AACCTGAGTC CAGAAGAGTT CCTTCCATTG TATATTCCTC TAGCACTACC
TATTACCTCT TTTGTAAGAC TAACAGCCCT CAAAATTTTT CATTCAGTGA TGTCTTCCTC
ATTGCATTTT AAGTTCAACA
There is no frequency submission for ss14687333.
No sufficient data to compute Hardy-weinberg probability for ss14687333.
There is no individual genotype data for ss14687333.
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