>gnl|dbSNP|ss1471006|allelePos=338|len=2915|taxid=9606|alleles='A/G'|mol=Genomic
AACATTCTAT ATGGCTAACT CTGAATATGA TCTTAGATTT TAATATTTTT CACACGGCAT
GCCAATCCCC CCAAAATTTC TCCTGCTGTG ACCTTCAATG ACCTACATTT GTTACACTTG
AGCAAAATCA AGTTCATTGC TATTCTCAGG CTATAATGAA AATTAAGGCT ATTTCTGTTT
CCTTCACATG CCCCAAAATT ACACAATTAG AATTAGGACT TCTATTATTG AATGTTAGTT
GTAGTAATGT TCAGCATACC ATGCAAATTT TGCTGAAGTA TACTTAATTT GACTGCTAAA
ATGTGTGATA TCCCTAGACA GGATTTACAT TATGAAA
R
TCACAGGAAA CAATTTTTAT CGAAAGTTGA AACTAAAAAT CCTTTGCAGG ACTGTCAAGC
AGAGAATGGG TACTCACGTT TCCTTTAACC ACATAATTAG AATCATTCTT GATGTCTCTG
GCTAGACCAA AATCACAAAT CTTTGTGATC CGACCATGAG TAAGGAGGAT ATTTCTGGCT
GCCAAGTCTC TGTGAATACA CTATTAGGTT GGAGGAGAAA AGAAAACCAT TTAAATTCAT
TTTAACTTGT AAAGAGTGAA AACTAACTTT TTAATACTAT AGTGTTGCTT ATATTATAAA
AAATCCAATA CTTTTGTTTT AAAGTATTCA GTACACCAAA AATAAAAATC AAAAGTACGC
CTTGAATGAT GTTCACATAA TCAAGAGTCT AATTATTATA ATCTCTTTTA AAAGCAATTC
TAATAAATGC TGTTTTCTTC TCAGGACTGC TTTCATTCAT AGGGAAATAC ATAAGAAATA
GTCATATCAT ATTGTTTAAA CTGAAAATTC ATTTTGCATG CATCTCTTTG AATGTCCTTT
CACAGAGTTC CTAATATGCC TTTGCAAATT CAATCTGACA TCTCCCAAGG ACACACGGAA
GAAGGTCTTT ATTTCAGCCA TCTTATATCC TTTCTTAGTT TGGTAATTGT TGGGAAATGT
CACCCATGAC ATTTAAGGGT AGGACTGGTA ACTCATTCTG TTCGGTTAAT CTTACTTCCT
AAGGAACTCC TTTCACCCTT CCACAGACCA TGCTCCTTGT TTTGGTTCCA TCATTCTTTC
CATTCCTAAC CTTCTCCCAA GTGTTTATTA CTCCCTCTGA CCCCTTATTT CCTGACACTT
CATAAGCCAC ACATATAATA TTTGGATCTA ACTTCAATAA AACTCAAGTC TATGCTTCAC
CCCAAGCCTT GTAACTATGA GGTGCCCTCT GCTTTTACTG ATAAAATGAT TCTGTTCTCT
AGGAACATAT CCTATATCCT AAAAGCCAAA AGTTTTAAAA GAATTTCACT GCATATAAAA
GAATATTCAT AGAAAAACTC ATTTAGACAG GCTTGTACTT TACAGCTTAT AAATTAGAAC
AGGAATTCCA AAGAGACAGC AGTTGGAACA TGAAGAAACT AAATTTCCTC TGCTTTTGGT
TACCACACTT CAAAATGACA TTCTGCATTT TAACTATGGC TCTAAAATGC TCTGTTCTCa
aaaaaaaaaa aaaaaaaaaa aaaaatcaaa aaaacaaaaC ACAAAACTCT TTAGAGAATC
ACTCCCACTT ACATTCTTGG AGGCGAGGAA AGCCATGCCC TTTGCCACCT GGTAAGAAAA
GCTCAGCAAG TCTTCTAAGT CTAGGGCCAA CTCGTCATCC TCCATGATGG CGGGAGTCAC
ATCTCTTTCT ATGTATGAGC CTGTGAGGAA GAGAGGATTT TTCTTAGCAA TTACAACCAT
AAAGGTCAGG AAAGGAAAAG ACAGTGGCAA TGACATACCA AAGGCTGGTA ATGAATGAAC
TAATGTGAAC TTGCAGGCAG ATCACTTCCC TGGTGTCCAG GAAAGGTAGA TGCTGAATCA
CAAAGTTAAT ATTTAACAAT CCTAGGCTGG GTTACAAAAT CCATAGAGGA GAGGGATGGC
GAATTAAAGC AAAGATCCCA TATCTATAGA AAGATACTCA GGCACAAAAA CATATGCTCT
GACCCCAAAC ACCCACTTGC AACCCTAACT GCCATTGACC ATTGGCACTG CTACCATAAA
GCAGAACTGG TCTGCATCAT TGCTACTGGG AATGATGTTA TATTCCACAT TAGCATGATA
TACATACTCT CTGTAAAGTT ACTCTTGGTT GCTTGATAGG TAGGTACTCA CCTATTCTCA
CAGATCTCCT TTTGTCGGCC TTGGTTGGGA CAACATAAGA AACTCCAGGT TTCATGTCCA
TGTACTCATT AGTACTATCG CTGCTGGGAG AGATGAAACA AGTCATGACT GAATCAAGTG
GGACATGTAG AAGGGCACTC ATGGGTCATG CTCTACCTCC TCATCCCCTT TGCTACATAA
TAGACTGGAC CAATTTGAGG AAAGTCATGT AAAGTTTGAA TAAAGAGTTT GAAAATCCTG
TTCTGTAAGA AATGAGTTTT TAATAATCGA TATTGGGGTC CATGCCCAGA AACTAGGTGT
CCTTTTTGTG TATAATCATA TAGAGGACTC AGGTTAGAAA TTTCCCGTCT CTTGACACAA
TGAATTTAAT GGGAGACAGA GAGCCAAATA TGGTATCCCG TATTACCTCA AACTCTCTAA
ATGAGCCCCA GGAGACAAGA TGAAAGAAAG ACAAAGAAGA GCTTCCAAGA CGTGTTATGC
AGGAGGCAGA GATCGTTAAC ATATAGTGAC TGATGGAGGA AGGTTTAAAA AAAAATCAAG
TTGGTTCAGA TAAACACCAA TAATTTGGAT GATTTTCTGA ACCATCTGGA CCTCTTCAAT
CTGCAACATT TGGCTGGAGA CTCTTCAAGA TTTCTAGTAC TTCCTGCTTC TGATTAGCAT
AGAAACACCA TGACAACAAT CTCCTTCAGA GTGTGCTGGT GGTTCCAATC CCATATG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | SC_12_A
- EAST ASIA | 22 | 22 | G=0.54545456
| A=0.45454547 | A/G=0.36363637
G/G=0.36363637
A/A=0.27272728
| Pr(chiSq=0.782,df=1)
=0.403 | Genotype
Freq. |
SC_12_AA
- NORTH AMERICA | 24 | 24 | A=0.75000000
| G=0.25000000 | A/A=0.58333331
A/G=0.33333334
G/G=0.08333334
| Pr(chiSq=0.148,df=1)
=0.752 | Genotype
Freq. |
| HapMap-CEU | 220 | 220 | G=0.66363639
| A=0.33636364 | G/G=0.44545454
A/G=0.43636364
A/A=0.11818182
| Pr(chiSq=0.056,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | G=0.70930231
| A=0.29069766 | G/G=0.53488374
A/G=0.34883720
A/A=0.11627907
| Pr(chiSq=1.021,df=1)
=0.317 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | G=0.70930231
| A=0.29069766 | G/G=0.50000000
A/G=0.41860464
A/A=0.08139535
| Pr(chiSq=0.020,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | A=0.83628321
| G=0.16371681 | A/A=0.69026548
A/G=0.29203540
G/G=0.01769911
| Pr(chiSq=0.500,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | A=0.72448981
| G=0.27551019 | A/A=0.53061223
A/G=0.38775510
G/G=0.08163265
| Pr(chiSq=0.040,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | G=0.67073172
| A=0.32926831 | A/G=0.51219511
G/G=0.41463414
A/A=0.07317073
| Pr(chiSq=1.044,df=1)
=0.317 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | G=0.71764708
| A=0.28235295 | G/G=0.51764709
A/G=0.40000001
A/A=0.08235294
| Pr(chiSq=0.014,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | A=0.82222223
| G=0.17777778 | A/A=0.66666669
A/G=0.31111112
G/G=0.02222222
| Pr(chiSq=0.371,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | G=0.58999997
| A=0.41000000 | A/G=0.50000000
G/G=0.34000000
A/A=0.16000000
| Pr(chiSq=0.056,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | A=0.63286716
| G=0.36713287 | A/A=0.43356642
A/G=0.39860141
G/G=0.16783217
| Pr(chiSq=2.893,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | G=0.67045456
| A=0.32954547 | G/G=0.45454547
A/G=0.43181819
A/A=0.11363637
| Pr(chiSq=0.046,df=1)
=1.000 | Genotype
Freq. |
