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Submitted SNP(ss) Details: ss14742956           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011512.9_57089
RefSNP(rs#)rs458354
Submitted Batch IDCHR13_NA17119_extra
Submitted DateNov 12, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA17119
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:Chr_13_17119_2-371i14.p1kaposition:72quality:40sequence:Chr_13_17119_2-384o01.q1kposition:102quality:40sequence:Chr_13_17119_2-275c07.p1kposition:214quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14742956|allelePos=201|len=985|taxid=9606|alleles='A/G'|mol=Genomic
 CAAGTTTAAG GTTTTGGCAA GTGTTTGAGA AAAATATGAA TTAAGCTCAT TTTCTGTGGA
 GACAAGTCTC TAGGCGTTTA GTTTTGGTTA AGTTAAATAC TTAAATCTAT TTAAAATTTT
 AAAGACCTTA GTAATGTAAA CAAATGGTGT TGAGTTTGGA CTTCTCTACA ATATCTATGT
 GGAATCTTAG GAAAGGAAGA
 R
 TGAAAGGATA CAATACATTT TAAATGGTAG TTCAGCCTAA ATCCTAAGCA TAAGCATAAT
 ACACTGCTGC Attttttttt gacagagcct aactctgtcc cccagactga agtgcagtgg
 tgccatcttg actcactgca accccagtct cctagattca agctattctc ctgcctcagc
 ctcccaagta tctgggatca caggcagaca ccagtcacac ccagctTGTt ttttgttttt
 tatgtttttt ctttttttgg agacacagtc ttgctctgtc acccaggctg gaatacaatg
 gcacaacctc ggctcactgc aacctccact tcccaggttc aagcgattct cctgcctcag
 cttcctgagt agttgggatt acaggcatgt gctgccatgc ccggctatct gcctcccagg
 ttcaagcgat tcttctgcct cagcctcttg agtagctggg attacaggca tgtgccacca
 tgcctggcta atttttgtat ttttagtaga gacagggttt caccatgttg gtcaggccgg
 tctcaaactc ctgacctcct gatccaccag cctcagcctc ccaaagtgct agaataatag
 gcgtgagcca ccatgcccag cccatttttt gtatttttaa tagaggtgag gtttcaccat
 gttgaccagg ctgatctcga actcctgacc tcaagtgatc tgcccccctc cacctgccaa
 aatgctggga ttacagacaa gagccactat gcctagccAA TATGTTACTT TAAAAAAATA
 AGTT

  Submitted Frequency for ss14742956 back to top
There is no frequency submission for ss14742956.


  dbSNP summary of Genotypes for ss14742956 back to top
No sufficient data to compute Hardy-weinberg probability for ss14742956.


  Submitted individual genotype for ss14742956 back to top
There is no individual genotype data for ss14742956.