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Submitted SNP(ss) Details: ss14904891           
Submitter
HandlePERLEGEN
Submitter SNP IDPS02202407
RefSNP(rs#)rs7896594
Submitted Batch ID11-NOV-2003
Submitted DateNov 13, 2003
Publication Cited11721056
First entry to dbSNPNov 13 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWAFER_HYB
Ascertainment Samplesize20
PopulationNCBI|NIHPDR
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14904891|allelePos=101|len=201|taxid=9606|alleles='G/A'|mol=Genomic
 TTCCTCCAGG ATAACTGCCT CACGTCTACC AGGCAGAAGG AATTGGATTT TTCCCTCTGT
 GGTGACATAG TCCTTTATTA AGCTGTATGT AGTACTTGCC
 R
 CCTTATTTTA TTTGGATATG TAGACCATCC GTCTTCCTCC TTTGGGCGGA TAGCGCCTTG
 ATGGTACGAT TGGGCATGGG CCATGTCATG TCCCTAGAAA

  Submitted Frequency for ss14904891 back to top
There is no frequency submission for ss14904891.


  dbSNP summary of Genotypes for ss14904891 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
Caucasian2424A=0.70833331
G=0.29166666A/A=0.50000000
A/G=0.41666666
G/G=0.08333334
Pr(chiSq=0.001,df=1)
=1.000
Genotype
Freq.
PDpanel4040A=0.77499998
G=0.22499999A/A=0.64999998
A/G=0.25000000
G/G=0.10000000
Pr(chiSq=1.604,df=1)
=0.251
Genotype
Freq.

  Submitted individual genotype for ss14904891 back to top
There is no individual genotype data for ss14904891.

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