NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss15423874           
Submitter
HandleSC_SNP
Submitter SNP IDNT_026943.13_10381720
RefSNP(rs#)rs709766
Submitted Batch IDCHR1_NA17019
Submitted DateNov 14, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 14 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA17019
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:1SNP2-181c15.q1kposition:192quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss15423874|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CTACAATTTG TTTCCACTGA GGGGTGGGTT GGGGAATACC TGGGTCCCCT TGAGAACATA
 CTCACTGTCA CTCGTATGGC CAATGTGCAC AATAAAATTA AGCAAAAGCA GCTTTTAGTC
 CAGAGGCAGA ACTCTGAGAA TAGACTCTCT ACGCACCTTG CTTATAGATA GCTATAAAAT
 TAGACTTTTA ACTGTCTTAA
 Y
 ATTATTTTCT CGCCATGATC TTAATCTCTT TTCTCATTCT TTCATGAATT TGCTGGGTTT
 ACTTTAGTTA ATGCTGGAGA GCCCAGATGA CATCTTCTGC TTCAAGTTCT GTCCGAGTGA
 TCCTAATATC ATTGCTGGAG GCTGTATCAA TGGGCAGGTA CTTAACAGAA TTTTTTTCAG
 CTATGTATTA ATGTAGACAA

  Submitted Frequency for ss15423874 back to top
There is no frequency submission for ss15423874.


  dbSNP summary of Genotypes for ss15423874 back to top
No sufficient data to compute Hardy-weinberg probability for ss15423874.


  Submitted individual genotype for ss15423874 back to top
There is no individual genotype data for ss15423874.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement