| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_077389.2_392668 | | RefSNP(rs#) | rs540871 | | Submitted Batch ID | CHR1_NA17019 | | Submitted Date | Nov 14, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Nov 14 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077389
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA17019 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1SNP2-175c04.q1kposition:-462quality:26 |
>gnl|dbSNP|ss15432122|allelePos=439|len=648|taxid=9606|alleles='A/G'|mol=Genomic TGCATAAATG AGAATCAGAG CTCCCCATAC AATACTGCCA CTGCCACTCT TCCTTGCAAA
TGCTCCTTTT AAGTCCATAC GTTAAGAATA CCATTCTGGG CTGGGTATGG TGGCTCACGC
CTGTAATCCC AGCACTCTGA GAGGCCGAGG CAAGCGGATC ACGAGGTCAA GTGTTTGAGA
CCAGCCTGGC CAATATGGTG AAACCCCATC TCTACTAAAA AATACAAAAA TTAGCCGAGC
GTGGTGGCGG GCGCCTGTAG TCCCAGCTAC TTGGGAGGCT GAGGCAGGAG AATTGCTTGA
ACCCGGGAGG TGGAGGTTGC AGTGAGCCGA GATCGCACCA CTGCACTCCA GCCTGGGCGA
CAGAGCGAGA CTCCGTCTCA AAAAAAAAAA AAAAAAAAAA AAAAACAAAT ACAGCTCCAT
GAAAGCAGGG ACTTCCTC
R
GTCTTGTTAA TAACTCTATC TCTAGCACCA GACCAGAGCC TGGTACATAG TAGGCATACA
TAATCATGTG TTGAGTACAT GAATGAATTA GTGATTGAAT GAATGAATTT TTTAAAATGC
ACTGAACTGA ATGTCTCTGA AGACAGTGTA GGGCCCTCTG GTACCACAGA GGCTGTGTCA
TGGGTCATGC CAGTACTCAC AAGAAATGT
There is no frequency submission for ss15432122.
No sufficient data to compute Hardy-weinberg probability for ss15432122.
There is no individual genotype data for ss15432122.
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