NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss154524336           
Submitter
HandleGMI
Submitter SNP IDGMI_SNP_71605404
RefSNP(rs#)rs9697642
Submitted Batch IDGMI24june2009snp_1
Submitted DateJun 24, 2009
Publication Cited[1] A highly annotated whole genome sequence of a Korean Individual
First entry to dbSNPJun 24 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodAK1
Ascertainment Samplesize2
PopulationAK1
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss154524336|allelePos=101|len=201|taxid=9606|alleles='C/T'|mol=Genomic
 AGCGTCCAGT TTCTCTTTGC TTAGCAGCCA TTATTCTATC CATATTGGCT TATCTGTTAA
 CCATTTGTAA AGGTATAGGT TCTGGAAGCT TAACAACGGC
 Y
 GCCGTCAAAA ATGATATCCT AATCTTTGGC AGGAACTTTG TCTTTCCACT TGAAGCAGTT
 CTTTCAAACC TTGCAAATAT TTTCCTAGTC CCATACCAGG

  Submitted Frequency for ss154524336 back to top
There is no frequency submission for ss154524336.


  dbSNP summary of Genotypes for ss154524336 back to top
No sufficient data to compute Hardy-weinberg probability for ss154524336.


  Submitted individual genotype for ss154524336 back to top
There is no individual genotype data for ss154524336.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement