NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1573868307           
Submitter
HandleEVA_GENOME_DK
Submitter SNP IDEVA_GENOME_DK_gatk_indels_rs112791300
RefSNP(rs#)rs112791300
Submitted Batch IDgatk
Submitted DateFeb 19, 2015
Publication CitedN.D.
First entry to dbSNPFeb 19 2015 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA HISEQ 2500
Ascertainment Samplesize30
PopulationDANISH PAN-GENOME
Allele
Observed AlleleGTGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1573868307|allelePos=26|len=51|taxid=9606|alleles='GTGT/-'|mol=Genomic
 GAGAGAGCGA GGCGGCTGGA GGTGG
 N
 GTGACACCAG GTGACTTAGC GGCCC

  Submitted Frequency for ss1573868307 back to top
There is no frequency submission for ss1573868307.


  dbSNP summary of Genotypes for ss1573868307 back to top
No sufficient data to compute Hardy-weinberg probability for ss1573868307.


  Submitted individual genotype for ss1573868307 back to top
There is no individual genotype data for ss1573868307.