Submitted SNP(ss) Details: ss15756

Submitted SNP(ss) Details: ss15756

Submitter
Handle	CGAP-GAI
Submitter SNP ID	60945
RefSNP(rs#)	rs13428
Submitted Batch ID	CANDIDATES.UG.4.20.99
Submitted Date	Aug 23, 1999
Publication Cited	[1] Reliable identification of large numbers of candidate SNPs from public EST data
First entry to dbSNP	Aug 23 1999 12:00:00:000AM

Resource Links
GenBank Accession	D79999 AF057160 D79999
Submitted Gene Name	KIAA0177
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	cDNA
Method	DEMIGLACE
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	G/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/!t_g

Validation
Validation Status
HWE Goodness of Fit	not applicable
In Expressed Sequence	Y

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
Candidate SNP predicted from aligned EST sequences.UniGene cluster ID from 4/20/99 build: Hs.77225

Fasta sequence (Legend)

 CAAAAGAAAA ATGGAATTAT CTCAGCCAGA AGTTTCTGAA GATTTTGAAG AGGATGCCTT
 AGGTGTACTA CCAGCTTTCA CATCAAATTT GGAACGTGGA
 S
 GTGTGGAAAA GCTATTGGAT TTAAGTTGGA CAGAGTCATG TAAACCAACA GCAACTGAAC
 CACTATTTAA GAAAGTCAGT CCATGGGAAA CATCTACTTC

Submitted Frequency for ss15756

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
POOLED_CEPH - MULTI-NATIONAL	188	C=0.62000000	G=0.38000000	0.471 +/-0.024			VALIDATED_01	CGAP-GAI

dbSNP summary of Genotypes for ss15756

No sufficient data to compute Hardy-weinberg probability for ss15756.

Submitted individual genotype for ss15756

There is no individual genotype data for ss15756.

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