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Submitted SNP(ss) Details: ss16021729           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.16_11097469
RefSNP(rs#)rs2456774
Submitted Batch IDCHR9_12_NA11321_2
Submitted DateNov 18, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 18 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9_12_NA11321
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S9A_2-1626k22.q1kposition:146quality:39sequence:S9A_2-1235b22.p1kposition:-651quality:56sequence:S9A_2-863g19.q1kposition:-153quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16021729|allelePos=207|len=486|taxid=9606|alleles='C/T'|mol=Genomic
 GGTGGACTTA TTTGCATATG TATATATACA TATTTTCCCT TTTTTGTGTA AAACATTATC
 AAGACGTAGA TCTACCTATG TCTATTTACA TTTTTGATAT AATTAAACCA CTTCCATATT
 GATGAACATT TAAATTATTT TCCAACTTGG TTATTGTTGC TCTTATTAAC AGTACTGCAC
 TGAATGTCCT TATAGATATT TATCTT
 Y
 GTATGCAACT TTATAGGATA AATTTTTAGA ATGGGAATGA TGGATTGAAG ATGTTTATTT
 ACATTTTGAT AGATATTGCC GGTTGCCCCC TAAAAAACTT GTAGCAATTT ACTCTTAAAT
 ACTCATGGTG TGTAATACTT ATTGTTTTAG TACATCATTG CCAAAACTTG GTTTTATCAA
 TCTGTTAACT ATGTGAAAAA GGCATATTAA GATTGTTTTA ATTTTATATT TCATGACAAT
 TTAACACTTC ATATTTAGCT ATTATAAACC GCCTATATT

  Submitted Frequency for ss16021729 back to top
There is no frequency submission for ss16021729.


  dbSNP summary of Genotypes for ss16021729 back to top
No sufficient data to compute Hardy-weinberg probability for ss16021729.


  Submitted individual genotype for ss16021729 back to top
There is no individual genotype data for ss16021729.

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