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Submitted SNP(ss) Details: ss16083271           
Submitter
HandleSC_SNP
Submitter SNP IDNT_030059.11_8475930
RefSNP(rs#)rs11202607
Submitted Batch IDCHR9_12_NA11321_2
Submitted DateNov 18, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 18 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9_12_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S9A_2-1297g16.p1kposition:144quality:45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16083271|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TAGAGTATTG ATTGATTGCT CATAAGTTAA ATTGGTAAAG TTAGAGACAA CTATTCTAAC
 ACCTCACCAT TGAAATTTAT ATGCCACCTT GTCTTTCATA AAAGCTGAAA ATTGTTACCT
 AAAATGAAAA TCAACTTCAT GTTTTGAAGA TAGTTATAAA TATTGTTCTT TGTTACAATT
 TCGGGCACCG CATATTAAAA
 Y
 GTAACTTTAT TGTTCCAATA TGTAACATGG AGGGCCAGGT CATAAATAAT GACATTATAA
 TGGGCTTTTG CACTGTTATT ATTTTTCCTT TGGAATGTGA AGGTCTGAAT GAGGGTTTTG
 ATTTTGAATG TTTCAATGTT TTTGAGAAGC CTTGCTTACA TTTTATGGTG TAGTCATTGG
 AAATGGAAAA ATGGCATTAT

  Submitted Frequency for ss16083271 back to top
There is no frequency submission for ss16083271.


  dbSNP summary of Genotypes for ss16083271 back to top
No sufficient data to compute Hardy-weinberg probability for ss16083271.


  Submitted individual genotype for ss16083271 back to top
There is no individual genotype data for ss16083271.