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Submitted SNP(ss) Details: ss162160246           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr7_27905564
RefSNP(rs#)rs198
Submitted Batch IDNA07022_snpassay_chr7
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162160246|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AAAGGTGGGC AGATTCCTAG TGGCAAGGAG CCATTTGGGG AGACAAAAGT GTCTAGAGAA
 GCCAAGGAGG CACAGCAAAG GCTGTGATTC TGGCCAACAA ATGAGGACTA TGTTCCCTGT
 TTCACCAAAT ATCAGGTCTG GAAAGATTAA CCGTGTTGCC AAGGCTGAGT TCAGGTTAAG
 CAAGTCATGT GACTCAGTGG CCTAAGCTTT CCTCAATGAG TCTGGACACC ACTGGTGATC
 TTTCTGAAGC
 Y
 CTCAGTAATC ACGGCTGATG TGGATATTTT TTTGGAGACA GGGTCTCGCT GTCACCCAGG
 CTGGTGTGCA GTGGTGTGAT TACAGTGCAC CGAAGCACCA ACCTCCTGGG CTCAAGCAAT
 CTTCTTGCCT CAGCCTCCCA AGTAGCTGAG ACTACAGGCA CGCCCCCCCA TGCCCAGGTA
 ATTTTTGGAT TTTTTGTAGA GATGGGGTCT CTCTATGTTG CCCAGGCTGG TTTCAAACTC
 CTGGGCTCAA

  Submitted Frequency for ss162160246 back to top
There is no frequency submission for ss162160246.


  dbSNP summary of Genotypes for ss162160246 back to top
No sufficient data to compute Hardy-weinberg probability for ss162160246.


  Submitted individual genotype for ss162160246 back to top
There is no individual genotype data for ss162160246.

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