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Submitted SNP(ss) Details: ss162714014           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr5_140007400
RefSNP(rs#)rs778593
Submitted Batch IDNA07022_snpassay_chr5
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162714014|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CGCCGCGCGT GCTGTGGGCG GGGGCTTCCC TCAACTTCAG GGAGGTCGAG GTCGTGACCC
 TGGCGTCCCG AAGCCCGCCC GCCTCACCAC GCCGCGCCTC ACCTGACGCC CTGGCTGCCG
 GGCGAGCGCT GACATAAGTG GATGCGAATC TCACGCAGGC CCAGCTTTGC CCCGACTCCT
 CGACTTGCTG CGGCCGCCGC CATCCTTGTT AATATCGAAG TCGCCAATTC CAGGTCTTCA
 GGCCAAGTGC
 Y
 CCGGTCTGAC CAACCGCGGA CCCTAAAGCC TAGCCCATAG GCTGCATGAG GCAGGGGCGG
 GGTAAAGCTT GGCCAATGAT ATAAAAGTAT TGTAGGACCG CTGCGAGGTC AATTTCTTTG
 CGCTCGGGGT TGGTCGGAGG GAAAAACAGG AAGCGGAAAG GCTGCGAACG CAAAGCAGTG
 TGGGTTGATT CTGAGGTGCA CTGTGGGAAA GAGCTTGTCG CTGCGGTGTT GCTGTTGGAG
 ACTCGATTGT

  Submitted Frequency for ss162714014 back to top
There is no frequency submission for ss162714014.


  dbSNP summary of Genotypes for ss162714014 back to top
No sufficient data to compute Hardy-weinberg probability for ss162714014.


  Submitted individual genotype for ss162714014 back to top
There is no individual genotype data for ss162714014.

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