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Submitted SNP(ss) Details: ss162980864           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_766985
RefSNP(rs#)rs2980319
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980864|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 GATGCTGGTT TAGAGACTTG CTACTCACGG GGAAGTCCTT GGGCCTCCTG TACTCACATT
 ACCTGGAACT TCTTGGAAAT TCAGAATCTC AGGCCCCAAC CCAGACGGAC TGAATCAAAA
 TCTTCATTGT GGTAAGACCC TCGGTGACAC ACAGGCCTGG GAAGCACAGG TTAGCGTGTC
 ACCTTGGGCA AAGCTCTCAG CATTGTGAGC CTCTGTTTTC TACTCTGTAA AGGAGGCATG
 AATATCTACA
 W
 CATCAGTTTG CCATGAGTAT TGAAAAATAA TGTCTTAGAA GCACAGGGCA GAGCCTGGCA
 TGTAGTTTGT GCTCAGTGCA CAGCAGACAA GAAACCACAT GCACCAGACC TGGGCGGCCG
 TCGGCAGCCC ACCCTGAGCA ACCATGGGTG GCCCTCTTGT CTCTCGGGAC AAGAAATGCT
 TCTTTAGAAA TGCTTCTTTC CTTTCTAAAA TGAAAGTTTT GGACAGTATT TCCTTTCATT
 TAAAAATTTC

  Submitted Frequency for ss162980864 back to top
There is no frequency submission for ss162980864.


  dbSNP summary of Genotypes for ss162980864 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980864.


  Submitted individual genotype for ss162980864 back to top
There is no individual genotype data for ss162980864.

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