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Submitted SNP(ss) Details: ss162983560           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_1055159
RefSNP(rs#)rs4072537
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162983560|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AAATCCAGGG AAACAGACAC TGTTATGGAT GTGAGCATCG GCTGCCAGAA CGAGAGGAAG
 CAGAAGAGGG GAAAAGGCCG ATTATCGTAG AAGAGTTAGG AAAATCAATC AAAGATACCC
 CCTTGAGAAC AGTTAAGTTC ACAGCTGTGA GTTCTGGAAA CCTTTATGTT TTAAAAATGA
 TTCCGAGGAC TCAGAGGGTA AAGCTCGCAC CAACTTAATT TGTTATTGCC TTTTCTATCA
 AAGTTATGCT
 Y
 GTGGCCGGAC ACAGTGGTTC GCATTTGGGA GGTCAAGGCG GGCGGATCAC TTGAGGTCAG
 GAGTTCGAGA CAAGCGTGGT CAGCATGATG AAACCCTGTC TCTACTAAAA ATACAAAAAA
 ATTAGCTGGA TGTGGTGGCG GGCACCTATA ATTCCAGCTA CTCTGGAGGC TGAGGCAGGA
 CAATCGCTTG CACCTGGAAG GCGGAGGTTG CAGTGAGCTC AGATGGCACC ATTGCCCTCC
 AGCCTGGGCA

  Submitted Frequency for ss162983560 back to top
There is no frequency submission for ss162983560.


  dbSNP summary of Genotypes for ss162983560 back to top
No sufficient data to compute Hardy-weinberg probability for ss162983560.


  Submitted individual genotype for ss162983560 back to top
There is no individual genotype data for ss162983560.

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