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Submitted SNP(ss) Details: ss163004629           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_3694881
RefSNP(rs#)rs9424282
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163004629|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CTGCTCTTTC CTGGCTTGGT ACCCAGGCCC CACAGCCTTG CCTGGGTGGT GGGGCAGGCA
 CTGCGAGCAA ACCCTTCTGT CCCAGCTTCC TCTAGGGCTG GAGGAAGACC CTGCTCAGGA
 TGCAAAGCCT GACCCTCGGG GATCTCTGGC AGCCTCGGTG CCGGCTCTGC CCCCAGAGAG
 GAGGCAACAG CATGTGGGCC CCCTGGAAGC CAGCACTCGC CCTTGGTCAG TGTGGCTGGT
 GAGTCCTAGT
 Y
 ACACTGGGTG TGGAGGAGAC AGGTAGGGCT GGACTTGATA GACTCTGAAC AGAGTTGGGG
 ATGGGCTGAT TACTCAGAGG ACACCTCCTG CTTCGCCTGG AATGGATGGC AGGGGTGATG
 GAATTTCTCA AGCCCCAAGT TGTGAAGGAA ATGAAAAAAG GAACCTGCTG GAATCCTCCG
 GCTCAAGCAA TCAAGCTGCT CAGACACGGG TAAGGGCAGC ATGGCTCAGA AATGGGATGG
 CGCTCAGAAG

  Submitted Frequency for ss163004629 back to top
There is no frequency submission for ss163004629.


  dbSNP summary of Genotypes for ss163004629 back to top
No sufficient data to compute Hardy-weinberg probability for ss163004629.


  Submitted individual genotype for ss163004629 back to top
There is no individual genotype data for ss163004629.