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Submitted SNP(ss) Details: ss163005150           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_3736449
RefSNP(rs#)rs2275826
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163005150|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 ACCAAAGTTA ACTCACCCTC ATCTCAGCAT CTGTAGCTCT GCCATCTATT TTAGCAAATC
 CCTCAAAAAT TGTTTTGTAG AGAATGTTCC TGCGTGTGTT GCTGTCGTCT GGAGGAAGGT
 ACTCCAGGAT GGAAGCCTGG TGCTGTCTGT ACATGTCCAA AATAATTCGA ACCGCCGTCT
 CGCGGACCTC ATACACTCTA TGCTCCAGGG CACTCACTGA AAACTAAAGT TGGGAGGGGC
 TCTTGTTACT
 S
 ATTCTTAAAA TAAAACTAAT TTCTTCCAGC TTACAAAAAA GGTACATTAT AAACATGTGA
 AAAATAAAAG AGAAAACATC CGTATTAAGT ATTATGAAAT ACTTCAAACA TAAAACCTCA
 CGGATCTACC GTCTCATCGT AAGCCGTGTT ATACTTTCAT CACGCTTGTT TTGGATCTTT
 TTTAAGAAAC AGAACGCTGT GGCTATAGTG CAATTTCATC CCTGCTGTGC GTCTCGGGGG
 CCCACAGTTT

  Submitted Frequency for ss163005150 back to top
There is no frequency submission for ss163005150.


  dbSNP summary of Genotypes for ss163005150 back to top
No sufficient data to compute Hardy-weinberg probability for ss163005150.


  Submitted individual genotype for ss163005150 back to top
There is no individual genotype data for ss163005150.