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Submitted SNP(ss) Details: ss163138923           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr2_16351069
RefSNP(rs#)rs667089
Submitted Batch IDNA19240_snpassay_chr2
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163138923|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 GAAAGGCCAA ACAAAGGAAG AAAAATCAAT GGTTCTTCCA AGATATAAAA CTCTCAGAGT
 TGATGGTCCC CAAACATCAG ATGTGAGGTG TGTCTCTGAG AATGGGCTTA TACAGATGCC
 ACGAAGAAAG ATGCTGAAAC TCCAGACCAT TACTATAGGT AGTCATGTAT CCATCCATCC
 ATTTATCTAT CTATCTACTC AAAATTTATT TATTCTTCCT TTCAAAGGAA GATTTACTGA
 ATGTCTACTG
 W
 GGTCTAGATA TGGTGCAATG TAAAAATATC AAATATAAAA TGAGTAAGAC TCTTGGAGTC
 TATGGTCAGT AAGGAAGAAA GGAATCAAAT GGTTTATCAC AAAACAATGA AAGAGGTGTT
 GGAATTGAAG CTATATAAAG GATTGTGTGA ACATATTGGA AGGAACAAAT TTTCTTATGG
 ATAGGTTTGA CAGTTTTCAC AAAGGAGAGA ACATTTGATT TTGGTCTTTA AGGATGAGTA
 AGTGTTTGTT

  Submitted Frequency for ss163138923 back to top
There is no frequency submission for ss163138923.


  dbSNP summary of Genotypes for ss163138923 back to top
No sufficient data to compute Hardy-weinberg probability for ss163138923.


  Submitted individual genotype for ss163138923 back to top
There is no individual genotype data for ss163138923.

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